RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 OR5H15A6NDH6 313 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 TMEM200CA6NKL6 621 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 THBS4P35443 961 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 NKG7Q16617 165 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 BHLHA15Q7RTS1 189 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-219ENST00000620786 BPIFCQ8NFQ6 507 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 BARX1Q9HBU1 254 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-219ENST00000620786 RBFOX1Q9NWB1 397 aaKnown RBP10.23□□□□□ -0.77
CLIP1-219ENST00000620786 RREB1Q92766 1687 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 MYO18AQ92614 2054 aaKnown RBP10.23□□□□□ -0.77
CLIP1-219ENST00000620786 SDCBPO00560 298 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-219ENST00000620786 GABRA1P14867 456 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 CD82P27701 267 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 PLA1AQ53H76 456 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 PAQR6Q6TCH4 344 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 BTNL3Q6UXE8 466 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 LINC01555Q8NAE3 123 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 EDARADDQ8WWZ3 215 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 FBXW5Q969U6 566 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 TNFRSF12AQ9NP84 129 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 TAAR3PQ9P1P4 343 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 MYO10Q9HD67 2058 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 PEX11BO96011 259 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 GLI4P10075 376 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 CCL4P13236 92 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 TNFAIP6P98066 277 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-219ENST00000620786 B3GNTL1Q67FW5 361 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-219ENST00000620786 WDR74Q6RFH5 385 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-219ENST00000620786 ZNF793Q6ZN11 406 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 DBX2Q6ZNG2 339 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 SYS1Q8N2H4 156 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 OR13F1Q8NGS4 319 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 OR4C3Q8NH37 302 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 CMTM3Q96MX0 182 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 SERTM1A2A2V5 107 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 TMEM235A6NFC5 223 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 ZFP92A6NM28 416 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 NUDT19A8MXV4 375 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 SSSCA1O60232 199 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 CT45A10P0DMU9 189 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 FCGR2CP31995 323 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 ZNF816Q0VGE8 651 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-219ENST00000620786 OR2T2Q6IF00 324 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 OR10V1Q8NGI7 309 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 HES4Q9HCC6 221 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 OSGIN2Q9Y236 505 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 TMEM30CPA0ZSE6 113 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 IAPPP10997 89 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 BPIFB3P59826 476 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 PRICKLE4Q2TBC4 344 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 OR2G3Q8NGZ4 309 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 ARHGDIGQ99819 225 aa10.23□□□□□ -0.77
CLIP1-219ENST00000620786 DUSP15Q9H1R2 295 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-219ENST00000620786 PCYT1BQ9Y5K3 369 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-219ENST00000620786 ARAP2Q8WZ64 1704 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 SIX6O95475 246 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 SFTPCP11686 197 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 RPS19P39019 145 aaKnown RBP10.22□□□□□ -0.77
CLIP1-219ENST00000620786 KLF3P57682 345 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-219ENST00000620786 OPCMLQ14982 345 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 C17orf107Q6ZR85 190 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 NDFIP1Q9BT67 221 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 PLA2G12AQ9BZM1 189 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 CHST6Q9GZX3 395 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 RNF32Q9H0A6 362 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 C11orf54Q9H0W9 315 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-219ENST00000620786 AGFG2O95081 481 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 HLA-HP01893 362 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 DTYMKP23919 212 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 SRD5A2P31213 254 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 C2orf76Q3KRA6 126 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 C16orf47Q6ZP98 133 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-219ENST00000620786 PTOV1Q86YD1 416 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 KDF1Q8NAX2 398 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-219ENST00000620786 SLC25A46Q96AG3 418 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 MOB3AQ96BX8 217 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 TM4SF19Q96DZ7 209 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 KIAA1551Q9HCM1 1747 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 C21orf140B9A014 251 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 ADRA2CP18825 462 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 CA6P23280 308 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 TCTN1Q2MV58 587 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 SYT6Q5T7P8 510 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-219ENST00000620786 STUMQ69YW2 141 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 RHBDD2Q6NTF9 364 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 OR52I2Q8NH67 350 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 RGPD4Q7Z3J3 1758 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 H0Y8G0 127 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 ST8SIA5O15466 376 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 ST8SIA3O43173 380 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 CYC1P08574 325 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 ZNF26P17031 533 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-219ENST00000620786 ACKR3P25106 362 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 TMEM268Q5VZI3 342 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 NDUFB11Q9NX14 153 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 SDK1Q7Z5N4 2213 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 OR5H14A6NHG9 310 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 OR5H1A6NKK0 313 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 NKX2-2O95096 273 aa10.22□□□□□ -0.77
CLIP1-219ENST00000620786 GOSR1O95249 250 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms