RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 GSTT1P30711 240 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 CD80P33681 288 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 CX3CR1P49238 355 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 ARMCX4Q5H9R4 360 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 SPATA24Q86W54 205 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 ZDHHC22Q8N966 263 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 OR11L1Q8NGX0 322 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 ERGIC1Q969X5 290 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 ZMYND19Q96E35 227 aaPredicted RBP14.34□□□□□ -0.11
HMGN3-203ENST00000620514 MRI1Q9BV20 369 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 ABHD6Q9BV23 337 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 SLC22A4Q9H015 551 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 MARCH7Q9H992 704 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 MRPL15Q9P015 296 aaKnown RBP14.34□□□□□ -0.11
HMGN3-203ENST00000620514 ZNF69Q9UC07 566 aa14.34□□□□□ -0.11
HMGN3-203ENST00000620514 TRIM77I1YAP6 450 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 GMDSO60547 372 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 FKBP6O75344 327 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 E2F6O75461 281 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 FSTL3O95633 263 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 ANXA2P07355 339 aaKnown RBP14.33□□□□□ -0.12
HMGN3-203ENST00000620514 SLC15A1P46059 708 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 GNB2P62879 340 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 GRB2P62993 217 aaKnown RBP14.33□□□□□ -0.12
HMGN3-203ENST00000620514 ACTG1P63261 375 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 PAX8Q06710 450 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 FLOT2Q14254 428 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 DNAL1Q4LDG9 190 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 PLBD1Q6P4A8 553 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 TIGD4Q8IY51 512 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 BCL6BQ8N143 479 aaPredicted RBP14.33□□□□□ -0.12
HMGN3-203ENST00000620514 BOLLQ8N9W6 283 aaKnown RBP14.33□□□□□ -0.12
HMGN3-203ENST00000620514 OR8B3Q8NGG8 313 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 RNF133Q8WVZ7 376 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 SPSB4Q96A44 273 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 OR8B2Q96RD0 313 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 DNAJC27Q9NZQ0 273 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 NUP50Q9UKX7 468 aa14.33□□□□□ -0.12
HMGN3-203ENST00000620514 IGHV2-70DA0A0C4DH43 119 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 TCRBV3S1A0A5B6 114 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 XRCC2O43543 280 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 SELENOFO60613 162 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 PTBP3O95758 552 aaKnown RBP14.32□□□□□ -0.12
HMGN3-203ENST00000620514 OSMP13725 252 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 CPT2P23786 658 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 FPR2P25090 351 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 HSD11B1P28845 292 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 PITPNBP48739 271 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 CBX1P83916 185 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 SFRP4Q6FHJ7 346 aaPredicted RBP14.32□□□□□ -0.12
HMGN3-203ENST00000620514 C12orf54Q6X4T0 127 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 ZNF826PQ6ZT77 177 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 FAM57BQ71RH2 274 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 SLC16A9Q7RTY1 509 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 PRSS45Q7RTY3 260 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 SIGLECL1Q8N7X8 197 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 FAM216AQ8WUB2 273 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 DACT3Q96B18 629 aaPredicted RBP14.32□□□□□ -0.12
HMGN3-203ENST00000620514 SGK3Q96BR1 496 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 PLEKHA8Q96JA3 519 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 JMJD8Q96S16 334 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 TOR3AQ9H497 397 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 FN3KRPQ9HA64 309 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 BRD7Q9NPI1 651 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 ZNF319Q9P2F9 582 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 RNF7Q9UBF6 113 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 POMPQ9Y244 141 aa14.32□□□□□ -0.12
HMGN3-203ENST00000620514 NOP16Q9Y3C1 178 aaKnown RBP14.32□□□□□ -0.12
HMGN3-203ENST00000620514 IGHV3OR16-10A0A075B7F0 116 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 PRR23D1E9PI22 279 aaPredicted RBP14.31□□□□□ -0.12
HMGN3-203ENST00000620514 GRPP07492 148 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 PRR23D2P0DMB1 279 aaPredicted RBP14.31□□□□□ -0.12
HMGN3-203ENST00000620514 PAICSP22234 425 aaKnown RBP14.31□□□□□ -0.12
HMGN3-203ENST00000620514 OPRL1P41146 370 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 ZNF121P58317 390 aaPredicted RBP14.31□□□□□ -0.12
HMGN3-203ENST00000620514 FAM3AP98173 230 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 CDK5Q00535 292 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 TIGD6Q17RP2 521 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 TUSC1Q2TAM9 212 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 TMEM236Q5W0B7 351 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 WDR25Q64LD2 544 aaPredicted RBP14.31□□□□□ -0.12
HMGN3-203ENST00000620514 ZNF841Q6ZN19 808 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 DCDC5Q6ZRR9 648 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 SHFQ7M4L6 423 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 NLRC3Q7RTR2 1065 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 CPOQ8IVL8 374 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 BBS1Q8NFJ9 593 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 RAB40AQ8WXH6 277 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 REEP6Q96HR9 211 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 OPA3Q9H6K4 179 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 PPP1R3EQ9H7J1 279 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 ZNF556Q9HAH1 456 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 C1orf123Q9NWV4 160 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 CTSZQ9UBR2 303 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 DNAJB9Q9UBS3 223 aa14.31□□□□□ -0.12
HMGN3-203ENST00000620514 SOX21Q9Y651 276 aaPredicted RBP14.31□□□□□ -0.12
HMGN3-203ENST00000620514 hCG_38984A0A1B0GV85 526 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 A6NLC8 198 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 C3orf80F5H4A9 247 aa14.3□□□□□ -0.12
HMGN3-203ENST00000620514 LGALS8O00214 317 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms