RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 ZGRF1Q86YA3 2104 aa13.85□□□□□ -0.19
CPSF1-213ENST00000620219 FTMTQ8N4E7 242 aa13.85□□□□□ -0.19
CPSF1-213ENST00000620219 OR52N4Q8NGI2 321 aa13.85□□□□□ -0.19
CPSF1-213ENST00000620219 HRGP04196 525 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 PTGS2P35354 604 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 RFX2P48378 723 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 RIPPLY1Q0D2K3 151 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 RNPS1Q15287 305 aaKnown RBP13.84□□□□□ -0.19
CPSF1-213ENST00000620219 DEGS2Q6QHC5 323 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 CD163Q86VB7 1156 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 RAB40AQ8WXH6 277 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 SNX18Q96RF0 628 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 OR5V1Q9UGF6 321 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 BOLA1Q9Y3E2 137 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 RBM7Q9Y580 266 aaKnown RBP13.84□□□□□ -0.19
CPSF1-213ENST00000620219 LOC100289279A0A1B0GTE1 492 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 hCG_1807616A0A1W2PRN6 198 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 CCR9P51686 369 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 ST6GALNAC5Q9BVH7 336 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 ZCCHC4Q9H5U6 513 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 ABCA4P78363 2273 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 ANGPTL7O43827 346 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 ACTL6AO96019 429 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 EDN3P14138 238 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 TMEM59Q9BXS4 323 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 OR2B2Q9GZK3 357 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 RANGRFQ9HD47 186 aaPredicted RBP13.84□□□□□ -0.19
CPSF1-213ENST00000620219 C15orf40Q8WUR7 153 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 TMEM38BQ9NVV0 291 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 PRSS50Q9UI38 385 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 DUSP13Q9UII6 198 aa13.84□□□□□ -0.19
CPSF1-213ENST00000620219 HSPB6O14558 160 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 TOXO94900 526 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 TTRP02766 147 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 AMY2AP04746 511 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 PGAM2P15259 253 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 ADRA2CP18825 462 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 VAMP1P23763 118 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 GUCA2AQ02747 115 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 ZNF169Q14929 603 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-213ENST00000620219 FYTTD1Q96QD9 318 aaKnown RBP13.83□□□□□ -0.2
CPSF1-213ENST00000620219 GINS4Q9BRT9 223 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 ZNF442Q9H7R0 627 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 TMEM235A6NFC5 223 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 WT1P19544 449 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-213ENST00000620219 BMP5P22003 454 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 ECH1Q13011 328 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 ASAH1Q13510 395 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 ADPRHL1Q8NDY3 354 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 FOXRED1Q96CU9 486 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-213ENST00000620219 PPP1R3EQ9H7J1 279 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 ZNF275Q9NSD4 429 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-213ENST00000620219 ZNF69Q9UC07 566 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 ALG5Q9Y673 324 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 HSPB2A8KAH6 182 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 SMLR1H3BR10 107 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 HSPB2Q16082 182 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 ADAT3Q96EY9 351 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-213ENST00000620219 SLC6A7Q99884 636 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 SOX7Q9BT81 388 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 PTTG3PQ9NZH4 202 aa13.83□□□□□ -0.2
CPSF1-213ENST00000620219 LIMK1P53667 647 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 NUFIP2Q7Z417 695 aaKnown RBP13.82□□□□□ -0.2
CPSF1-213ENST00000620219 ELMOD2Q8IZ81 293 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 MOB1AQ9H8S9 216 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 ASCL3Q9NQ33 180 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 PRRG2O14669 202 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 GALP22466 123 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 LSM6P62312 80 aaKnown RBP13.82□□□□□ -0.2
CPSF1-213ENST00000620219 FOXO1Q12778 655 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 LIX1LQ8IVB5 337 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 SKA3Q8IX90 412 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 OR52H1Q8NGJ2 320 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 OR1J2Q8NGS2 313 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 ST7LQ8TDW4 575 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 MS4A3Q96HJ5 214 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 PLEKHJ1Q9NW61 149 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 DLL3Q9NYJ7 618 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 FIGNL2A6NMB9 653 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 ANKRD30BLA7E2S9 258 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 IGHMP01871 453 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 TAS2R20P59543 309 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 RAB35Q15286 201 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 BAIAP2L2Q6UXY1 529 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 ADGRE4PQ86SQ3 457 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 GLRX5Q86SX6 157 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 ARMC10Q8N2F6 343 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 CMBLQ96DG6 245 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 PDCD10Q9BUL8 212 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 MRI1Q9BV20 369 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 A0A0G2JK05 382 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 DNPH1O43598 174 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 SERPINA5P05154 406 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 MMP16P51512 607 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 EFNB2P52799 333 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 MRPS34P82930 218 aaKnown RBP13.82□□□□□ -0.2
CPSF1-213ENST00000620219 PLA2G7Q13093 441 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 Q6ZTK2 550 aa13.82□□□□□ -0.2
CPSF1-213ENST00000620219 CPNE2Q96FN4 548 aaPredicted RBP13.82□□□□□ -0.2
CPSF1-213ENST00000620219 MRPL13Q9BYD1 178 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms