RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 BCL2L15Q5TBC7 163 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 PRSS48Q7RTY5 328 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 MRPL21Q7Z2W9 205 aaKnown RBP16.87■□□□□ 0.29
UPF3A-211ENST00000618700 ELMOD2Q8IZ81 293 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 PRSS35Q8N3Z0 413 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 OR2G2Q8NGZ5 317 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 HAVCR2Q8TDQ0 301 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 PPP1R14AQ96A00 147 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 SGK3Q96BR1 496 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 CMBLQ96DG6 245 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 REEP6Q96HR9 211 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 LYZL4Q96KX0 146 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 LURAP1Q96LR2 239 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 ZNF391Q9UJN7 358 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 LAMP3Q9UQV4 416 aa16.87■□□□□ 0.29
UPF3A-211ENST00000618700 DSCAMO60469 2012 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 hCG_38984A0A1B0GV85 526 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 E9PI62 339 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 MYL12BO14950 172 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 CD53P19397 219 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 CFL1P23528 166 aaKnown RBP16.86■□□□□ 0.29
UPF3A-211ENST00000618700 KIR3DL2P43630 455 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 TGM4P49221 684 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 SELENOVP59797 346 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 NANOS3P60323 173 aaKnown RBP16.86■□□□□ 0.29
UPF3A-211ENST00000618700 DOC2BQ14184 412 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 TIGD6Q17RP2 521 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 ALKBH6Q3KRA9 238 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 PGAP1Q75T13 922 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 NANOGP1Q8N7R0 232 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 RPS4Y2Q8TD47 263 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 CCL19Q99731 98 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 PURGQ9UJV8 347 aaKnown RBP16.86■□□□□ 0.29
UPF3A-211ENST00000618700 GTF2A1LQ9UNN4 478 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 SLC22A13Q9Y226 551 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 ERGIC3Q9Y282 383 aa16.86■□□□□ 0.29
UPF3A-211ENST00000618700 LSM2Q9Y333 95 aaKnown RBP16.86■□□□□ 0.29
UPF3A-211ENST00000618700 NAV2Q8IVL1 2488 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 TRIM64A6NGJ6 449 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 OVOL3O00110 214 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 MRPS14O60783 128 aaKnown RBP16.85■□□□□ 0.29
UPF3A-211ENST00000618700 LALBAP00709 142 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 RAF1P04049 648 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 CCR9P51686 369 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 GBX2P52951 348 aaPredicted RBP16.85■□□□□ 0.29
UPF3A-211ENST00000618700 WNT4P56705 351 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 SNRPD2P62316 118 aaKnown RBP16.85■□□□□ 0.29
UPF3A-211ENST00000618700 KCTD21Q4G0X4 260 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 OR2T2Q6IF00 324 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 BABAM2Q9NXR7 383 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 FRRS1LQ9P0K9 344 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 TAAR3PQ9P1P4 343 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 ST6GALNAC2Q9UJ37 374 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 ARFGEF3Q5TH69 2177 aa16.85■□□□□ 0.29
UPF3A-211ENST00000618700 A0A1W2PPW3 197 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 IQCF6A8MYZ5 107 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 SELEP16581 610 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 EEF1B2P24534 225 aaKnown RBP16.84■□□□□ 0.29
UPF3A-211ENST00000618700 PPOXP50336 477 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 MMP15P51511 669 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 FAM3AP98173 230 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 TNK1Q13470 666 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 ALKBH1Q13686 389 aaKnown RBP16.84■□□□□ 0.29
UPF3A-211ENST00000618700 OR8B8Q15620 311 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 GFOD2Q3B7J2 385 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 CCDC58Q4VC31 144 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 XAF1Q6GPH4 301 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 KLBQ86Z14 1044 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 PLPP7Q8NBV4 271 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 OR51E1Q8TCB6 317 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 MND1Q9BWT6 205 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 FBXO9Q9UK97 447 aaPredicted RBP16.84■□□□□ 0.29
UPF3A-211ENST00000618700 ANKRD17O75179 2603 aaKnown RBP16.84■□□□□ 0.29
UPF3A-211ENST00000618700 CSMD2Q7Z408 3487 aa16.84■□□□□ 0.29
UPF3A-211ENST00000618700 A0A1B0GTI1 187 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 OR4C45A6NMZ5 311 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 CD300LBA8K4G0 201 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 PDZD2O15018 2839 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 TIMM8AO60220 97 aaPredicted RBP16.83■□□□□ 0.28
UPF3A-211ENST00000618700 CCL1P22362 96 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 ALDH3B1P43353 468 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 GSK3AP49840 483 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 GTF2A1P52655 376 aaPredicted RBP16.83■□□□□ 0.28
UPF3A-211ENST00000618700 CHN2P52757 468 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 TBCEQ15813 527 aaPredicted RBP16.83■□□□□ 0.28
UPF3A-211ENST00000618700 MOGQ16653 247 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 Q6ZSR3 168 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 GATAD2BQ8WXI9 593 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 SOX7Q9BT81 388 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 CACNG6Q9BXT2 260 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 CCDC90BQ9GZT6 254 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 TRIM36Q9NQ86 728 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 GPR84Q9NQS5 396 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 CGGBP1Q9UFW8 167 aaPredicted RBP16.83■□□□□ 0.28
UPF3A-211ENST00000618700 PLEKHA6Q9Y2H5 1048 aa16.83■□□□□ 0.28
UPF3A-211ENST00000618700 A0A1B0GWJ7 208 aa16.82■□□□□ 0.28
UPF3A-211ENST00000618700 LOC390937A0A1W2PQ73 354 aa16.82■□□□□ 0.28
UPF3A-211ENST00000618700 H7C417 338 aa16.82■□□□□ 0.28
UPF3A-211ENST00000618700 M0R233 179 aa16.82■□□□□ 0.28
UPF3A-211ENST00000618700 LILRA1O75019 489 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms