RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 DVL1P1P54792 670 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-228ENST00000618469 ZFP1Q6P2D0 407 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 LRRN1Q6UXK5 716 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 FAM57BQ71RH2 274 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 SLC16A9Q7RTY1 509 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 BCDIN3DQ7Z5W3 292 aaKnown RBP13.48□□□□□ -0.25
BRCA1-228ENST00000618469 MOGAT3Q86VF5 341 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-228ENST00000618469 OR56B2PQ8NGI1 322 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 OR51F2Q8NH61 342 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 TMEM163Q8TC26 289 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 DVL3Q92997 716 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-228ENST00000618469 SIGLEC11Q96RL6 698 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 CNN2Q99439 309 aaKnown RBP13.48□□□□□ -0.25
BRCA1-228ENST00000618469 RBM4BQ9BQ04 359 aaKnown RBP13.48□□□□□ -0.25
BRCA1-228ENST00000618469 GABARAPL3Q9BY60 117 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 TTTY10Q9BZA0 68 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 GCM1Q9NP62 436 aa13.48□□□□□ -0.25
BRCA1-228ENST00000618469 A0A1B0GWJ7 208 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 CA6P23280 308 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 PSMA6P60900 246 aaKnown RBP13.47□□□□□ -0.25
BRCA1-228ENST00000618469 BTG1P62324 171 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 OR8G1Q15617 311 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 RHOUQ7L0Q8 258 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 TMEM186Q96B77 213 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 REEP6Q96HR9 211 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 PGAM5Q96HS1 289 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 IL4I1Q96RQ9 567 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 TEAD3Q99594 435 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 OSBPL10Q9BXB5 764 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 YIPF3Q9GZM5 350 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 SP140LQ9H930 580 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 NOP16Q9Y3C1 178 aaKnown RBP13.47□□□□□ -0.25
BRCA1-228ENST00000618469 LRP12Q9Y561 859 aa13.47□□□□□ -0.25
BRCA1-228ENST00000618469 SLC22A31A6NKX4 558 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 EI24O14681 340 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 CYB5R3P00387 301 aaPredicted RBP13.46□□□□□ -0.25
BRCA1-228ENST00000618469 SBK2P0C263 348 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 PCMT1P22061 227 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 POLR2IP36954 125 aaKnown RBP13.46□□□□□ -0.25
BRCA1-228ENST00000618469 HCCSP53701 268 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 ZMYND11Q15326 602 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 PRAMEF6Q5VXH4 476 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 NXNL2Q5VZ03 156 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 PRSS45Q7RTY3 260 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 KRT77Q7Z794 578 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 SPICQ8N5J4 248 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 OR52H1Q8NGJ2 320 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 SPSB4Q96A44 273 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 RAB3IPQ96QF0 476 aaPredicted RBP13.46□□□□□ -0.25
BRCA1-228ENST00000618469 SLC22A4Q9H015 551 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 OR10A2Q9H208 303 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 HIF1ANQ9NWT6 349 aa13.46□□□□□ -0.25
BRCA1-228ENST00000618469 MRPL15Q9P015 296 aaKnown RBP13.46□□□□□ -0.25
BRCA1-228ENST00000618469 hCG_38984A0A1B0GV85 526 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 TMEM178BH3BS89 294 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 IFNL4K9M1U5 179 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 PSMD9O00233 223 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 KCNAB3O43448 404 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 ALOX5APP20292 161 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 CD200P41217 278 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 MAB21L1Q13394 359 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 AADACL4Q5VUY2 407 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 MEPCEQ7L2J0 689 aaKnown RBP13.45□□□□□ -0.26
BRCA1-228ENST00000618469 GID4Q8IVV7 300 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 RFLNBQ8N5W9 214 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 UFSP2Q9NUQ7 469 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 H2AFY2Q9P0M6 372 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-228ENST00000618469 PCDHB10Q9UN67 800 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 COPS3Q9UNS2 423 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 ORC6Q9Y5N6 252 aa13.45□□□□□ -0.26
BRCA1-228ENST00000618469 TRAV20A0A0B4J274 112 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 LRRC30A6NM36 301 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 ANKRD30BLA7E2S9 258 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 ZNF205O95201 554 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 ALPLP05186 524 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 ANPEPP15144 967 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 CFL1P23528 166 aaKnown RBP13.44□□□□□ -0.26
BRCA1-228ENST00000618469 MDH2P40926 338 aaKnown RBP13.44□□□□□ -0.26
BRCA1-228ENST00000618469 GATA4P43694 442 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 FAM3AP98173 230 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 TMEM155Q4W5P6 130 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 KCTD18Q6PI47 426 aaPredicted RBP13.44□□□□□ -0.26
BRCA1-228ENST00000618469 SLC35F2Q8IXU6 374 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 KLHL36Q8N4N3 616 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 CELF2-AS1Q8N7Q2 184 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 SGK3Q96BR1 496 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 NIPAL2Q9H841 368 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 ADGRL4Q9HBW9 690 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 ZNF319Q9P2F9 582 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 IKZF2Q9UKS7 526 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 TMEM14AQ9Y6G1 99 aa13.44□□□□□ -0.26
BRCA1-228ENST00000618469 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.43□□□□□ -0.26
BRCA1-228ENST00000618469 PRR32B1ATL7 298 aa13.43□□□□□ -0.26
BRCA1-228ENST00000618469 PLPP2O43688 288 aa13.43□□□□□ -0.26
BRCA1-228ENST00000618469 GMDSO60547 372 aa13.43□□□□□ -0.26
BRCA1-228ENST00000618469 FAM20BO75063 409 aa13.43□□□□□ -0.26
BRCA1-228ENST00000618469 IRF2P14316 349 aa13.43□□□□□ -0.26
BRCA1-228ENST00000618469 DDOSTP39656 456 aa13.43□□□□□ -0.26
BRCA1-228ENST00000618469 CDC42P60953 191 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms