RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ZNF69Q9UC07 566 aa15.92■□□□□ 0.14
CDX1-202ENST00000616154 TRRAPQ9Y4A5 3859 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 OTX1P32242 354 aaPredicted RBP15.91■□□□□ 0.14
CDX1-202ENST00000616154 CENPAP49450 140 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 ADARB1P78563 741 aaKnown RBP15.91■□□□□ 0.14
CDX1-202ENST00000616154 FOXL1Q12952 345 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 CRMP1Q14194 572 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 PTGES3Q15185 160 aaKnown RBP15.91■□□□□ 0.14
CDX1-202ENST00000616154 IZUMO2Q6UXV1 221 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 CYB561A3Q8NBI2 242 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 OR5L1Q8NGL2 311 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 ZNRF4Q8WWF5 429 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 HRASLS5Q96KN8 279 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 ATF6BQ99941 703 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 MRI1Q9BV20 369 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 ZNF747Q9BV97 191 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 CMC2Q9NRP2 79 aa15.91■□□□□ 0.14
CDX1-202ENST00000616154 H0YAE9 185 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 TMEM178BH3BS89 294 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 IFNL4K9M1U5 179 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 ACSM4P0C7M7 580 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 PRTN3P24158 256 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 MMP16P51512 607 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 ESCO2Q56NI9 601 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 TEX30Q5JUR7 227 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 SLX4IPQ5VYV7 408 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 LINC00346Q8IVM7 164 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 MUC20Q8N307 709 aaPredicted RBP15.9■□□□□ 0.14
CDX1-202ENST00000616154 PROKR2Q8NFJ6 384 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 OR10S1Q8NGN2 331 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 TEX47Q8TBZ9 253 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 MAP6Q96JE9 813 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 GCM1Q9NP62 436 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 FAM118AQ9NWS6 357 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 OR5V1Q9UGF6 321 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 LRCH1Q9Y2L9 728 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 PCDHGB1Q9Y5G3 927 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 COMMD3-BMI1R4GMX3 469 aa15.9■□□□□ 0.14
CDX1-202ENST00000616154 DNAJC9-AS1A6NH13 148 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 H3BN98 237 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 CPT2P23786 658 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 PYCR1P32322 319 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 HSPA13P48723 471 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 ZIK1Q3SY52 487 aaPredicted RBP15.89■□□□□ 0.13
CDX1-202ENST00000616154 PRR31Q5SQ13 230 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 C12orf73Q69YU5 71 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 SLC27A4Q6P1M0 643 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.89■□□□□ 0.13
CDX1-202ENST00000616154 BCL6BQ8N143 479 aaPredicted RBP15.89■□□□□ 0.13
CDX1-202ENST00000616154 OR2AJ1Q8NGZ0 328 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 TFAP2CQ92754 450 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 C1orf147Q96MC9 270 aaPredicted RBP15.89■□□□□ 0.13
CDX1-202ENST00000616154 ZNF184Q99676 751 aaPredicted RBP15.89■□□□□ 0.13
CDX1-202ENST00000616154 ADI1Q9BV57 179 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 CDADC1Q9BWV3 514 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 RIBC2Q9H4K1 309 aa15.89■□□□□ 0.13
CDX1-202ENST00000616154 CEACAM18A8MTB9 384 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 IQCF6A8MYZ5 107 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 IFNGP01579 166 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 HLA-DQA2P01906 255 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 PSKH1P11801 424 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 SPI1P17947 270 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 GRK5P34947 590 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 BLVRAP53004 296 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 EFNB1P98172 346 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 PAX8Q06710 450 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 GINS1Q14691 196 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 LINC01590Q5TEZ4 76 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 SHISA2Q6UWI4 295 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 OR5AS1Q8N127 324 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 DHRSXQ8N5I4 330 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 ZNF48Q96MX3 618 aaPredicted RBP15.88■□□□□ 0.13
CDX1-202ENST00000616154 PTTG3PQ9NZH4 202 aa15.88■□□□□ 0.13
CDX1-202ENST00000616154 LOC100130705A0A1B0GUX0 176 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 TMPRSS2O15393 492 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 WNT2P09544 360 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 PPIAL4GP0DN37 164 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 ZNF823P16415 610 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 POU1F1P28069 291 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 CAPGP40121 348 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 PAX2Q02962 417 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 BAMBIQ13145 260 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 HLXQ14774 488 aaPredicted RBP15.87■□□□□ 0.13
CDX1-202ENST00000616154 TTC23Q5W5X9 447 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 LYPD4Q6UWN0 246 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 OR8G5Q8NG78 346 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 OR9Q1Q8NGQ5 310 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 OR13G1Q8NGZ3 307 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 MEGF10Q96KG7 1140 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 DUX5Q96PT3 197 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 MARCH7Q9H992 704 aa15.87■□□□□ 0.13
CDX1-202ENST00000616154 RIIAD1A6NNX1 92 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 CLDN34H7C241 214 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 RNASE1P07998 156 aaKnown RBP15.86■□□□□ 0.13
CDX1-202ENST00000616154 ZNF3P17036 446 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 FMO3P31513 532 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 CD80P33681 288 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 SRP9P49458 86 aaKnown RBP15.86■□□□□ 0.13
CDX1-202ENST00000616154 ENTPD1P49961 510 aa15.86■□□□□ 0.13
CDX1-202ENST00000616154 TMEM236Q5W0B7 351 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms