RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 LRRTM1Q86UE6 522 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 CDC20BQ86Y33 519 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 BAP18Q8IXM2 172 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 GALNT16Q8N428 558 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 GPX8Q8TED1 209 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SCARB1Q8WTV0 552 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZCCHC4Q9H5U6 513 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC17A5Q9NRA2 495 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 FBXO4Q9UKT5 387 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 PCDHGA5Q9Y5G8 931 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 BORCS7-ASMTA0A0B4J1R7 106 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 CTDSPLO15194 276 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 SGCEO43556 437 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 GSTZ1O43708 216 aaPredicted RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ANGPTL7O43827 346 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 DIRAS3O95661 229 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 GABRR1P24046 479 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 CSF2RBP32927 897 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 CD96P40200 585 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 HTR5AP47898 357 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 SSR4P51571 173 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 FAM76BQ5HYJ3 339 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 YRDCQ86U90 279 aaKnown RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 KCNK15Q9H427 330 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 UBE2J1Q9Y385 318 aaPredicted RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 TNCP24821 2201 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 WNT11O96014 354 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 CFDP00746 253 aaPredicted RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 IGHV3-9P01782 118 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 MGMTP16455 207 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 HLA-BQ31612 363 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 LGALSLQ3ZCW2 172 aaPredicted RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 FAM74A1Q5RGS3 127 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 MKXQ8IYA7 352 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 LRRC18Q8N456 261 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR52N4Q8NGI2 321 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 LIPHQ8WWY8 451 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 MICU1Q9BPX6 476 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 TRIOO75962 3097 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 RALGAPA2Q2PPJ7 1873 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 FREM1Q5H8C1 2179 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 WDR90Q96KV7 1748 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 MRPL33O75394 65 aaKnown RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 LYPD3O95274 346 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ABHD16AO95870 558 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 BGLAPP02818 100 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ICAM2P13598 275 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 PVALBP20472 110 aaPredicted RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 KIR3DL2P43630 455 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 SSBP1Q04837 148 aaKnown RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 GGTLC2Q14390 218 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 GK2Q14410 553 aaPredicted RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 PRSS35Q8N3Z0 413 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 MAFIPQ8WZ33 124 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ARL11Q969Q4 196 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 UCK1Q9HA47 277 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 CHD9Q3L8U1 2897 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 IGLV1-36A0A0B4J1U3 117 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 TRBV5-5A0A0J9YX44 114 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 GJE1A6NN92 205 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF705EA8MWA4 302 aaPredicted RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 PRR32B1ATL7 298 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 F8W036 122 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC34A2O95436 690 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 GSTP1P09211 210 aaKnown RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR5H8P0DN80 308 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 CDAP32320 146 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 HRH1P35367 487 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ARHGDIBP52566 201 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 BLOC1S1P78537 153 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 SHBQ15464 509 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 SPICQ8N5J4 248 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 HSD17B11Q8NBQ5 300 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 MCHR2Q969V1 340 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ALX4Q9H161 411 aaPredicted RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 MOB1AQ9H8S9 216 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 SDHAF2Q9NX18 166 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 KLHL13Q9P2N7 655 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 LRRC37A2A6NM11 1700 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 IGKV3D-11A0A0A0MRZ8 115 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 TMEM200CA6NKL6 621 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 TSPAN2O60636 221 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 NPIPB7O75200 414 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 VSIG8P0DPA2 414 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 TPT1P13693 172 aaKnown RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 TBPP20226 339 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ATP1B3P54709 279 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 PLGLB1Q02325 96 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 SRYQ05066 204 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 EXOSC6Q5RKV6 272 aaKnown RBP5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 SIGIRRQ6IA17 410 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ACOT7LQ6ZUV0 252 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 TMUB2Q71RG4 321 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 TMEM104Q8NE00 496 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR52H1Q8NGJ2 320 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR5M9Q8NGP3 310 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 CPT1CQ8TCG5 803 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF721Q8TF20 911 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 PP6455Q8WZ26 134 aa5.03□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF845Q96IR2 970 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms