RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 AUP1Q9Y679 476 aa21.13■□□□□ 0.97
VEGFA-227ENST00000615393 STAB1Q9NY15 2570 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 PRR23D1E9PI22 279 aaPredicted RBP21.12■□□□□ 0.97
VEGFA-227ENST00000615393 FKBP6O75344 327 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 FSHBP01225 129 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 HMGN1P05114 100 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 PRR23D2P0DMB1 279 aaPredicted RBP21.12■□□□□ 0.97
VEGFA-227ENST00000615393 ANXA8P13928 327 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 FPR2P25090 351 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 CX3CR1P49238 355 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 HILS1P60008 231 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 PRAMEF6Q5VXH4 476 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 NLRC3Q7RTR2 1065 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 SPERTQ8NA61 448 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 PLPP7Q8NBV4 271 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 NEIL1Q96FI4 390 aaPredicted RBP21.12■□□□□ 0.97
VEGFA-227ENST00000615393 ABHD6Q9BV23 337 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 MARCH7Q9H992 704 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 UFSP2Q9NUQ7 469 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 DNAJB9Q9UBS3 223 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 POMPQ9Y244 141 aa21.12■□□□□ 0.97
VEGFA-227ENST00000615393 TCRBV3S1A0A5B6 114 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 C5orf63A6NC05 138 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 TBX1O43435 398 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 FAM20BO75063 409 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 ANXA2P07355 339 aaKnown RBP21.11■□□□□ 0.97
VEGFA-227ENST00000615393 ANOS1P23352 680 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 DDOSTP39656 456 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 GNB2P62879 340 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 MZT1Q08AG7 82 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 ARMCX4Q5H9R4 360 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 RHOUQ7L0Q8 258 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.11■□□□□ 0.97
VEGFA-227ENST00000615393 OR8B3Q8NGG8 313 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 OR56B2PQ8NGI1 322 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 RNF133Q8WVZ7 376 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 SPSB4Q96A44 273 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 OR8B2Q96RD0 313 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 SLC6A7Q99884 636 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 TEX12Q9BXU0 123 aa21.11■□□□□ 0.97
VEGFA-227ENST00000615393 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-227ENST00000615393 MPPED2Q15777 294 aa21.1■□□□□ 0.97
VEGFA-227ENST00000615393 TIGD6Q17RP2 521 aa21.1■□□□□ 0.97
VEGFA-227ENST00000615393 FAM201AQ5SY85 155 aa21.1■□□□□ 0.97
VEGFA-227ENST00000615393 PLBD1Q6P4A8 553 aa21.1■□□□□ 0.97
VEGFA-227ENST00000615393 TIGD4Q8IY51 512 aa21.1■□□□□ 0.97
VEGFA-227ENST00000615393 HS3ST5Q8IZT8 346 aa21.1■□□□□ 0.97
VEGFA-227ENST00000615393 PAPD5Q8NDF8 572 aaKnown RBP21.1■□□□□ 0.97
VEGFA-227ENST00000615393 ZMYND19Q96E35 227 aaPredicted RBP21.1■□□□□ 0.97
VEGFA-227ENST00000615393 RNF7Q9UBF6 113 aa21.1■□□□□ 0.97
VEGFA-227ENST00000615393 TRIM77I1YAP6 450 aa21.09■□□□□ 0.97
VEGFA-227ENST00000615393 PTBP3O95758 552 aaKnown RBP21.09■□□□□ 0.97
VEGFA-227ENST00000615393 CDK5Q00535 292 aa21.09■□□□□ 0.97
VEGFA-227ENST00000615393 BTNL3Q6UXE8 466 aa21.09■□□□□ 0.97
VEGFA-227ENST00000615393 DCDC5Q6ZRR9 648 aa21.09■□□□□ 0.97
VEGFA-227ENST00000615393 OR52H1Q8NGJ2 320 aa21.09■□□□□ 0.97
VEGFA-227ENST00000615393 ANKRD30BLA7E2S9 258 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 PRODHO43272 600 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 H2BFMP0C1H6 154 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 PRKACGP22612 351 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 CFL1P23528 166 aaKnown RBP21.08■□□□□ 0.97
VEGFA-227ENST00000615393 PITPNBP48739 271 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 KCNJ8Q15842 424 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 KLHL12Q53G59 568 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 DNAJC9Q8WXX5 260 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 DVL3Q92997 716 aaPredicted RBP21.08■□□□□ 0.97
VEGFA-227ENST00000615393 REEP6Q96HR9 211 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 NTN4Q9HB63 628 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 C14orf119Q9NWQ9 140 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 DNAJC27Q9NZQ0 273 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 NUP50Q9UKX7 468 aa21.08■□□□□ 0.97
VEGFA-227ENST00000615393 LYNP07948 512 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 OPRL1P41146 370 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 ZNF121P58317 390 aaPredicted RBP21.07■□□□□ 0.96
VEGFA-227ENST00000615393 PAX8Q06710 450 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 SLC35D3Q5M8T2 416 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 LRRN1Q6UXK5 716 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 FAM57BQ71RH2 274 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 SLC16A9Q7RTY1 509 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.07■□□□□ 0.96
VEGFA-227ENST00000615393 CPOQ8IVL8 374 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 ZNF454Q8N9F8 522 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 OTOSQ8NHW6 89 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 C22orf15Q8WYQ4 148 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 NRBF2Q96F24 287 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 OR10A2Q9H208 303 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 TRIM36Q9NQ86 728 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 KIF17Q9P2E2 1029 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 CLN8Q9UBY8 286 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 ARHGAP32A7KAX9 2087 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 ANK2Q01484 3957 aa21.07■□□□□ 0.96
VEGFA-227ENST00000615393 IGHV2-70DA0A0C4DH43 119 aa21.06■□□□□ 0.96
VEGFA-227ENST00000615393 HAX1O00165 279 aa21.06■□□□□ 0.96
VEGFA-227ENST00000615393 GSC2O15499 205 aa21.06■□□□□ 0.96
VEGFA-227ENST00000615393 ACTG1P63261 375 aa21.06■□□□□ 0.96
VEGFA-227ENST00000615393 FAM3AP98173 230 aa21.06■□□□□ 0.96
VEGFA-227ENST00000615393 OR8S1Q8NH09 359 aa21.06■□□□□ 0.96
VEGFA-227ENST00000615393 FAM216AQ8WUB2 273 aa21.06■□□□□ 0.96
VEGFA-227ENST00000615393 RAB40AQ8WXH6 277 aa21.06■□□□□ 0.96
VEGFA-227ENST00000615393 SGK3Q96BR1 496 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms