RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 C3P1Q6ZMU1 363 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 TMUB2Q71RG4 321 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 CASTOR1Q8WTX7 329 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 TMEM41AQ96HV5 264 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 SRXN1Q9BYN0 137 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 CST11Q9H112 138 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 RAB22AQ9UL26 194 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 MRPS28Q9Y2Q9 187 aaKnown RBP12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 A0A0J9YW62 118 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 CDK2AP1O14519 115 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 TP53I11O14683 189 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 HLA-AP01891 365 aaKnown RBP12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 PI3P19957 117 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 AVPR2P30518 371 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 OTX2P32243 289 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 STARP49675 285 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 C12orf45Q8N5I9 185 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 TMEM105Q8N8V8 129 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 SPERTQ8NA61 448 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 NAXEQ8NCW5 288 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 AGBL5Q8NDL9 886 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 ST8SIA4Q92187 359 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 C1orf147Q96MC9 270 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 GPER1Q99527 375 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 LPAR5Q9H1C0 372 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 NARFLQ9H6Q4 476 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 MAB21L2Q9Y586 359 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 BDP1A6H8Y1 2624 aa12.41□□□□□ -0.42
PCDHGA3-202ENST00000612467 METTL21EPA6NDL7 271 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 FAM25EA8MYX2 175 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 SPDEFO95238 335 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 ONECUT2O95948 504 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 CD63P08962 238 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 TDGF1P13385 188 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 PPP1R1AQ13522 171 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 RNASE10Q5GAN6 216 aaKnown RBP12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 DKKL1Q9UK85 242 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 NOP16Q9Y3C1 178 aaKnown RBP12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 LOC102723996A0A087X1L8 192 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 RFPL3SP0C7P2 107 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 LIFP15018 202 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 FAHP16930 419 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 AKR1C4P17516 323 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 CSNK1A1P48729 337 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 HIST3H3Q16695 136 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 RSPO1Q2MKA7 263 aaPredicted RBP12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 GLRX5Q86SX6 157 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 RPS19BP1Q86WX3 136 aaKnown RBP12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 DOCK10Q96BY6 2186 aa12.4□□□□□ -0.42
PCDHGA3-202ENST00000612467 NSG1A0A0A6YYJ2 146 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 CRTAPO75718 401 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 CD74P04233 296 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 SSR4P51571 173 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 TMEM50BP56557 158 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 DHODHQ02127 395 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 Q0VFX4 171 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 CLLU1Q5K131 121 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 GTPBP8Q8N3Z3 284 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 RELL2Q8NC24 303 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 OR10R2Q8NGX6 335 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 GSX2Q9BZM3 304 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 SLC39A1Q9NY26 324 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 KCNN3Q9UGI6 736 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 TMEM265A0A087WTH1 108 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 TMEM14DPA8MWL7 114 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 NTN3O00634 580 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 TPPPO94811 219 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 VAMP1P23763 118 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 S100A11P31949 105 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 RFC3P40938 356 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 SLC35A1P78382 337 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 H3F3AP84243 136 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 BAMBIQ13145 260 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 ENDOGQ14249 297 aaKnown RBP12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 IL11RAQ14626 422 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 ZNF529Q6P280 563 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 CRIP3Q6Q6R5 217 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 KCTD9Q7L273 389 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 OR2AE1Q8NHA4 323 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 PIGTQ969N2 578 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 PGAM5Q96HS1 289 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 ARHGAP5-AS1Q96IT6 56 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 SCPEP1Q9HB40 452 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 IFT46Q9NQC8 304 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 HPF1Q9NWY4 346 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 ZNF224Q9NZL3 707 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 ZNF581Q9P0T4 197 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 PLEKHA6Q9Y2H5 1048 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 HDGFL3Q9Y3E1 203 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 FREM1Q5H8C1 2179 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 PCSK5Q92824 1860 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 SULT1C2O00338 296 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 LAMTOR5O43504 91 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 PLATP00750 562 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 AANATQ16613 207 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 NHLRC3Q5JS37 347 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 MARCH1Q8TCQ1 289 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 ROBO4Q8WZ75 1007 aa12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 NECAB3Q96P71 396 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA3-202ENST00000612467 WDR54Q9H977 334 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms