RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 OR52N4Q8NGI2 321 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 REEP6Q96HR9 211 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 MTFP1Q9UDX5 166 aa11.74□□□□□ -0.53
TCF3-220ENST00000611869 ASAH2BP0C7U1 165 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 PATE4P0C8F1 98 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 ZNF728P0DKX0 622 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 MFGE8Q08431 387 aaPredicted RBP11.73□□□□□ -0.53
TCF3-220ENST00000611869 DEGS2Q6QHC5 323 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 VASH2Q86V25 355 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 SHISA5Q8N114 240 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 OR5AS1Q8N127 324 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 PRSS35Q8N3Z0 413 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 OR2Y1Q8NGV0 311 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 KCNE4Q8WWG9 221 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 ASB10Q8WXI3 467 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 C5orf49A4QMS7 147 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 NRASP01111 189 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 ACSM4P0C7M7 580 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 IL11P20809 199 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 TMUB2Q71RG4 321 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 OR1S1Q8NH92 325 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 CMTM3Q96MX0 182 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 TAAR9Q96RI9 348 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 HRH4Q9H3N8 390 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 DNAJB11Q9UBS4 358 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 H7C2Y5 167 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 PPIAP62937 165 aaKnown RBP11.73□□□□□ -0.53
TCF3-220ENST00000611869 RPS27AP62979 156 aaKnown RBP11.73□□□□□ -0.53
TCF3-220ENST00000611869 UBA52P62987 128 aaKnown RBP11.73□□□□□ -0.53
TCF3-220ENST00000611869 DMWDQ09019 674 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 SLC10A1Q14973 349 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 NLRC3Q7RTR2 1065 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 KCNJ15Q99712 375 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 ZFP57Q9NU63 452 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 FBXO4Q9UKT5 387 aa11.73□□□□□ -0.53
TCF3-220ENST00000611869 RAC2P15153 192 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 SNRPNP63162 240 aaKnown RBP11.72□□□□□ -0.53
TCF3-220ENST00000611869 INSM1Q01101 510 aaPredicted RBP11.72□□□□□ -0.53
TCF3-220ENST00000611869 FBXW12Q6X9E4 464 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 SLC51BQ86UW2 128 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 ZNF680Q8NEM1 530 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 OR2AE1Q8NHA4 323 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 FOXB1Q99853 325 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 BCO1Q9HAY6 547 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 C1orf123Q9NWV4 160 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 TSPAN2O60636 221 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 TMEM127O75204 238 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 TSPAN15O95858 294 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 CCL3P10147 92 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 VHLLQ6RSH7 139 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 NELFAQ9H3P2 528 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 TMEM9BQ9NQ34 198 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 ZNF275Q9NSD4 429 aaPredicted RBP11.72□□□□□ -0.53
TCF3-220ENST00000611869 OR5H15A6NDH6 313 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 SNRPGP15A8MWD9 76 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 K7EPK0 472 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 SULT1C2O00338 296 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 NDUFB6O95139 128 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 CELA2AP08217 269 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 ZNF133P52736 654 aaPredicted RBP11.72□□□□□ -0.53
TCF3-220ENST00000611869 CLN3Q13286 438 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 FAM71E2Q8N5Q1 922 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 AMELYQ99218 206 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 KLF13Q9Y2Y9 288 aaPredicted RBP11.72□□□□□ -0.53
TCF3-220ENST00000611869 CACNA1GO43497 2377 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 TNFSF12O43508 249 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 GSG1Q2KHT4 349 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 CD200R1LQ6Q8B3 271 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 HINT2Q9BX68 163 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 CNTD2Q9H8S5 307 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.72□□□□□ -0.53
TCF3-220ENST00000611869 PRDM6Q9NQX0 595 aa11.72□□□□□ -0.53
TCF3-220ENST00000611869 TMEM200CA6NKL6 621 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 SPRY1O43609 319 aaPredicted RBP11.71□□□□□ -0.53
TCF3-220ENST00000611869 TMIGD3P0DMS9 266 aaPredicted RBP11.71□□□□□ -0.53
TCF3-220ENST00000611869 OMGP23515 440 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 IDH3GP51553 393 aaPredicted RBP11.71□□□□□ -0.53
TCF3-220ENST00000611869 ESCO2Q56NI9 601 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 PMS2CLQ68D20 193 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 GLDNQ6ZMI3 551 aaPredicted RBP11.71□□□□□ -0.53
TCF3-220ENST00000611869 OR9K2Q8NGE7 335 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 OR1J2Q8NGS2 313 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 ADIPOR1Q96A54 375 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 ZNF2Q9BSG1 426 aaPredicted RBP11.71□□□□□ -0.53
TCF3-220ENST00000611869 TRAPPC2LQ9UL33 140 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 IGKV1D-42A0A075B6H8 117 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 OR5H14A6NHG9 310 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 PHF1O43189 567 aaPredicted RBP11.71□□□□□ -0.53
TCF3-220ENST00000611869 KLF4O43474 513 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 FLVCR1-AS1Q8TAF5 88 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 PGLYRP3Q96LB9 341 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 RGCCQ9H4X1 137 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 ZMIZ1Q9ULJ6 1067 aa11.71□□□□□ -0.53
TCF3-220ENST00000611869 ALX3O95076 343 aa11.71□□□□□ -0.54
TCF3-220ENST00000611869 PDGFBP01127 241 aaPredicted RBP11.71□□□□□ -0.54
TCF3-220ENST00000611869 SERPINF1P36955 418 aa11.71□□□□□ -0.54
TCF3-220ENST00000611869 SLC25A26Q70HW3 274 aa11.71□□□□□ -0.54
TCF3-220ENST00000611869 MRGPREQ86SM8 312 aa11.71□□□□□ -0.54
TCF3-220ENST00000611869 ZNF709Q8N972 641 aa11.71□□□□□ -0.54
TCF3-220ENST00000611869 EXD3Q8N9H8 876 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms