RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 C9orf170A2RU37 121 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 AKR1C4P17516 323 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 KLK2P20151 261 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 CASRP41180 1078 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 EIF1P41567 113 aaKnown RBP15.23■□□□□ 0.03
NEK3-206ENST00000611833 SRSF4Q08170 494 aaKnown RBP15.23■□□□□ 0.03
NEK3-206ENST00000611833 HLA-BQ31612 363 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 FAM57BQ71RH2 274 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 OR1S1Q8NH92 325 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 CASTOR1Q8WTX7 329 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 GPER1Q99527 375 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 NUDT16L1Q9BRJ7 211 aaKnown RBP15.23■□□□□ 0.03
NEK3-206ENST00000611833 FBLN5Q9UBX5 448 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 HDGFL3Q9Y3E1 203 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 LOC105371267A0A1B0GV96 52 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 TP53I11O14683 189 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 TLX3O43711 291 aaPredicted RBP15.23■□□□□ 0.03
NEK3-206ENST00000611833 SSX5O60225 188 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 BAMBIQ13145 260 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 GLRX5Q86SX6 157 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 RTN4RL2Q86UN3 420 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 OR4K15Q8NH41 348 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 MITD1Q8WV92 249 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 PPP1R1CQ8WVI7 109 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 ST8SIA2Q92186 375 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 DMRTA2Q96SC8 542 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 LPAR5Q9H1C0 372 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 PPA2Q9H2U2 334 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 ZNF319Q9P2F9 582 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 EML6Q6ZMW3 1958 aa15.23■□□□□ 0.03
NEK3-206ENST00000611833 MED12Q93074 2177 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 OR2AT4A6NND4 320 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 KRBOX1C9JBD0 128 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 SLC25A4P12235 298 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 TBPP20226 339 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 AVPR2P30518 371 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 OR3A4PP47883 348 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 ATXN7L3Q14CW9 347 aaPredicted RBP15.22■□□□□ 0.03
NEK3-206ENST00000611833 TUSC1Q2TAM9 212 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 KCTD9Q7L273 389 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 OR2W3Q7Z3T1 314 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 OR5AS1Q8N127 324 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 RELL2Q8NC24 303 aaPredicted RBP15.22■□□□□ 0.03
NEK3-206ENST00000611833 ADAD2Q8NCV1 583 aaKnown RBP15.22■□□□□ 0.03
NEK3-206ENST00000611833 TMEM104Q8NE00 496 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 KCNG3Q8TAE7 436 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 ELP5Q8TE02 316 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 RAB3CQ96E17 227 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 BANF2Q9H503 90 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 TNFSF18Q9UNG2 199 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 CHCHD2Q9Y6H1 151 aaPredicted RBP15.22■□□□□ 0.03
NEK3-206ENST00000611833 AQP7P3A6NL99 342 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 LGALS8O00214 317 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 OR2F2O95006 317 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 IL2RAP01589 272 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 CELA2AP08217 269 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 ANOS1P23352 680 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 ADH6P28332 368 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 GUCA1AP43080 201 aaPredicted RBP15.22■□□□□ 0.03
NEK3-206ENST00000611833 CLDN17P56750 224 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 SLC35A1P78382 337 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 OR2F1Q13607 317 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 SGCAQ16586 387 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 FAHD2BQ6P2I3 314 aaPredicted RBP15.22■□□□□ 0.03
NEK3-206ENST00000611833 DOK3Q7L591 496 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 KCNRGQ8N5I3 272 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 FADS6Q8N9I5 356 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 FAHD2AQ96GK7 314 aa15.22■□□□□ 0.03
NEK3-206ENST00000611833 VRK1Q99986 396 aaPredicted RBP15.22■□□□□ 0.03
NEK3-206ENST00000611833 PNRC2Q9NPJ4 139 aaKnown RBP15.22■□□□□ 0.03
NEK3-206ENST00000611833 A8MXK9 166 aa15.21■□□□□ 0.03
NEK3-206ENST00000611833 CDC14BO60729 498 aa15.21■□□□□ 0.03
NEK3-206ENST00000611833 FKBP2P26885 142 aaKnown RBP15.21■□□□□ 0.03
NEK3-206ENST00000611833 ATP1B3P54709 279 aa15.21■□□□□ 0.03
NEK3-206ENST00000611833 BEX5Q5H9J7 111 aa15.21■□□□□ 0.03
NEK3-206ENST00000611833 OR2I1PQ8NGU4 316 aa15.21■□□□□ 0.03
NEK3-206ENST00000611833 TMEM59Q9BXS4 323 aa15.21■□□□□ 0.03
NEK3-206ENST00000611833 SLC25A32Q9H2D1 315 aa15.21■□□□□ 0.03
NEK3-206ENST00000611833 PILRBQ9UKJ0 227 aa15.21■□□□□ 0.03
NEK3-206ENST00000611833 FRYLO94915 3013 aa15.21■□□□□ 0.03
NEK3-206ENST00000611833 A0A0A6YYD4 124 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 A0A1B0GW55 424 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 SOCS1O15524 211 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 EFSO43281 561 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 CRTAPO75718 401 aaPredicted RBP15.21■□□□□ 0.02
NEK3-206ENST00000611833 DUX4L2P0CJ85 424 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 DUX4L3P0CJ86 424 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 DUX4L4P0CJ87 422 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 DUX4L5P0CJ88 424 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 DUX4L6P0CJ89 424 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 DUX4L7P0CJ90 424 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 HLA-GP17693 338 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 DLSTP36957 453 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 STARP49675 285 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 GRB2P62993 217 aaKnown RBP15.21■□□□□ 0.02
NEK3-206ENST00000611833 ZNF345Q14585 488 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 PCOLCEQ15113 449 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 KCNMB1Q16558 191 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 HIST3H3Q16695 136 aa15.21■□□□□ 0.02
NEK3-206ENST00000611833 PMS2CLQ68D20 193 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms