RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ASAH1Q13510 395 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 ARTNQ5T4W7 220 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF770Q6IQ21 691 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-218ENST00000610726 EGFL6Q8IUX8 553 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 CTHRC1Q96CG8 243 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 OCSTAMPQ9BR26 566 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 HS3ST3B1Q9Y662 390 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 PCNX1Q96RV3 2341 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF646O15015 1829 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-218ENST00000610726 TRIM64CA6NLI5 447 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 B4E171 279 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 SLC17A2O00624 439 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 SPRY1O43609 319 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-218ENST00000610726 S100A6P06703 90 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 TSPAN7P41732 249 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 UBE2MP61081 183 aaKnown RBP6.49□□□□□ -1.37
CSDE1-218ENST00000610726 GUCA2AQ02747 115 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 PDCD1Q15116 288 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 OR8B8Q15620 311 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 ACTBL2Q562R1 376 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 AADACL3Q5VUY0 350 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 CCDC190Q86UF4 302 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 LSRQ86X29 649 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-218ENST00000610726 OR2M3Q8NG83 312 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 STOML3Q8TAV4 291 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 PCNPQ8WW12 178 aaKnown RBP6.49□□□□□ -1.37
CSDE1-218ENST00000610726 CLDN23Q96B33 292 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 FNDC1Q4ZHG4 1894 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-218ENST00000610726 M0R1B8 84 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 DEGS1O15121 323 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 XRCC2O43543 280 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 SNAPC5O75971 98 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 APOC3P02656 99 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF728P0DKX0 622 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 MGMTP16455 207 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 PTBP1P26599 531 aaKnown RBP eCLIP6.49□□□□□ -1.374e-9■■■■■ 37.3
CSDE1-218ENST00000610726 RFX2P48378 723 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 CDONQ4KMG0 1287 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 PABPC1L2AQ5JQF8 200 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 SLC22A25Q6T423 547 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 PDZD9Q8IXQ8 264 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 SPAG16Q8N0X2 631 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 OR11L1Q8NGX0 322 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 CD300LFQ8TDQ1 290 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 ABHD3Q8WU67 409 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 SLC25A21Q9BQT8 299 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-218ENST00000610726 CCDC86Q9H6F5 360 aaKnown RBP6.49□□□□□ -1.37
CSDE1-218ENST00000610726 MGAMO43451 1857 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 CUL9Q8IWT3 2517 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 CCSO14618 274 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 TSPAN2O60636 221 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 LYZL6O75951 148 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 FGF5P12034 268 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 SPINK2P20155 84 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 BMP5P22003 454 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 GFRALQ6UXV0 394 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 SLC7A5P1Q8MH63 180 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 GABRG1Q8N1C3 465 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 LILRB2Q8N423 598 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 OIT3Q8WWZ8 545 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 KISS1RQ969F8 398 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-218ENST00000610726 DOK1Q99704 481 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 PTDSS2Q9BVG9 487 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 COL4A6Q14031 1691 aa6.49□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF705EA8MWA4 302 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-218ENST00000610726 AGPAT2O15120 278 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 PTP4A3O75365 173 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 BGLAPP02818 100 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 FTH1P19P0C7X4 201 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 CRYBA2P53672 197 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 ERVK-16P61578 105 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 MGAT2Q10469 447 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 ARSJQ5FYB0 599 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-218ENST00000610726 SLC38A9Q8NBW4 561 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 OR1J1Q8NGS3 322 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 OR6X1Q8NH79 312 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 SUN5Q8TC36 379 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 SPSB2Q99619 263 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 RTL8AQ9BWD3 113 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 BARHL1Q9BZE3 327 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 FAM234AQ9H0X4 552 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 CYSLTR2Q9NS75 346 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 HAO2Q9NYQ3 351 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 B3GAT1Q9P2W7 334 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 ST3GAL6Q9Y274 331 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 TCF20Q9UGU0 1960 aaKnown RBP6.48□□□□□ -1.37
CSDE1-218ENST00000610726 POM121CA8CG34 1229 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 ATG12O94817 140 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 IL11P20809 199 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 OMGP23515 440 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 ZNF133P52736 654 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-218ENST00000610726 MLF1P58340 268 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 GSG1Q2KHT4 349 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 FHL5Q5TD97 284 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 SLC23A3Q6PIS1 610 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 OR10AC1Q8NH08 325 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 ASB10Q8WXI3 467 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 EIF5A2Q9GZV4 153 aaKnown RBP6.48□□□□□ -1.37
CSDE1-218ENST00000610726 HRASLSQ9HDD0 168 aa6.48□□□□□ -1.37
CSDE1-218ENST00000610726 ZFP57Q9NU63 452 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms