RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SLC6A9P48067 706 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 IGLV3-21P80748 117 aaPredicted RBP18.13■□□□□ 0.49
SSBP3-216ENST00000610401 MEF2DQ14814 521 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 OR2A2Q6IF42 318 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 ZNF813Q6ZN06 617 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 FAM57BQ71RH2 274 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 RXFP4Q8TDU9 374 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 ST7LQ8TDW4 575 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 AQP3Q92482 292 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 ARL11Q969Q4 196 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 THADAQ6YHU6 1953 aa18.13■□□□□ 0.49
SSBP3-216ENST00000610401 SERPINA2P20848 420 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 ASCL1P50553 236 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 ANKRD55Q3KP44 614 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 C5orf66Q9H5L9 145 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 RPH3AQ9Y2J0 694 aaPredicted RBP18.12■□□□□ 0.49
SSBP3-216ENST00000610401 MRPS28Q9Y2Q9 187 aaKnown RBP18.12■□□□□ 0.49
SSBP3-216ENST00000610401 FRG2CA6NGY1 282 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 WDPCPO95876 746 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 MUC1P15941 1255 aaPredicted RBP18.12■□□□□ 0.49
SSBP3-216ENST00000610401 FLI1Q01543 452 aaPredicted RBP18.12■□□□□ 0.49
SSBP3-216ENST00000610401 ROM1Q03395 351 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 SLC16A13Q7RTY0 426 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 LIPHQ8WWY8 451 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 SCPEP1Q9HB40 452 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 RHPN2P1A8MT19 583 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 ZNF878C9JN71 531 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 CD74P04233 296 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 FOLR1P15328 257 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 PPT1P50897 306 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 TMEM244Q5VVB8 128 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 GPR84Q9NQS5 396 aa18.12■□□□□ 0.49
SSBP3-216ENST00000610401 LSM5Q9Y4Y9 91 aaKnown RBP18.12■□□□□ 0.49
SSBP3-216ENST00000610401 RALGAPA1Q6GYQ0 2036 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 F5H5K5 113 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 ZNHIT1O43257 154 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 HOXC4P09017 264 aaPredicted RBP18.11■□□□□ 0.49
SSBP3-216ENST00000610401 ITGA3P26006 1051 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 SLC6A8P48029 635 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 CSNK2A1P68400 391 aaPredicted RBP18.11■□□□□ 0.49
SSBP3-216ENST00000610401 HSF1Q00613 529 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 HFEQ30201 348 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 PGAP1Q75T13 922 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 C1QL2Q7Z5L3 287 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 CSNK2A3Q8NEV1 391 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 USB1Q9BQ65 265 aaKnown RBP18.11■□□□□ 0.49
SSBP3-216ENST00000610401 HDHD3Q9BSH5 251 aaPredicted RBP18.11■□□□□ 0.49
SSBP3-216ENST00000610401 EHFQ9NZC4 300 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 FAM221AA4D161 298 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 MEGF11A6BM72 1044 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 CEBPGP53567 150 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 SNRPEP62304 92 aaKnown RBP18.11■□□□□ 0.49
SSBP3-216ENST00000610401 SP6Q3SY56 376 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 OR5D14Q8NGL3 314 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 STOML3Q8TAV4 291 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 PHOSPHO2Q8TCD6 241 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 EDEM2Q9BV94 578 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 VN1R1Q9GZP7 353 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 MTIF3Q9H2K0 278 aaKnown RBP18.11■□□□□ 0.49
SSBP3-216ENST00000610401 KLRF1Q9NZS2 232 aa18.11■□□□□ 0.49
SSBP3-216ENST00000610401 DXOO77932 396 aaKnown RBP18.1■□□□□ 0.49
SSBP3-216ENST00000610401 RAB13P51153 203 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 FOXF1Q12946 379 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 PDCD1Q15116 288 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 C14orf28Q4W4Y0 310 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 SLC22A24Q8N4F4 322 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 SEMA6DQ8NFY4 1073 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 OR1L3Q8NH93 324 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 AKR1E2Q96JD6 320 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 RHOFQ9HBH0 211 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 EDARQ9UNE0 448 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 ADAM10O14672 748 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 RAMP1O60894 148 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 OR51T1Q8NGJ9 327 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 RNF141Q8WVD5 230 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 UQCC1Q9NVA1 299 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 C9JQL5 133 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 IGKV3-11P04433 115 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 ZNF806P0C7X5 589 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 GABRR1P24046 479 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 LRRC18Q8N456 261 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 ZNF283Q8N7M2 679 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 TERB2Q8NHR7 220 aa18.1■□□□□ 0.49
SSBP3-216ENST00000610401 ALG1L2C9J202 215 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 LDLRAD4O15165 306 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 DUS4LO95620 317 aaKnown RBP18.09■□□□□ 0.49
SSBP3-216ENST00000610401 SLC25A4P12235 298 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 FBLP22087 321 aaKnown RBP18.09■□□□□ 0.49
SSBP3-216ENST00000610401 RBMS3Q6XE24 437 aaKnown RBP18.09■□□□□ 0.49
SSBP3-216ENST00000610401 GRINAQ7Z429 371 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 OR10S1Q8NGN2 331 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 OR5H2Q8NGV7 314 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 NANPQ8TBE9 248 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 TOMM40LQ969M1 308 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 PIGTQ969N2 578 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 SLC17A5Q9NRA2 495 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 KLHL13Q9P2N7 655 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 LPAR6P43657 344 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 SCAND1P57086 179 aa18.09■□□□□ 0.49
SSBP3-216ENST00000610401 RAB11FIP2Q7L804 512 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms