RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 ADPRHL1Q8NDY3 354 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 FAM213BQ8TBF2 198 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 HLA-CQ95604 372 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 TP53RKQ96S44 253 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 SH3BGRL3Q9H299 93 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 DYRK1BQ9Y463 629 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 LTBP2Q14767 1821 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 HEATR5AQ86XA9 2040 aa11.24□□□□□ -0.61
CTCFL-218ENST00000608440 TRBV11-1A0A0K0K1C0 115 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 HSBP1L1C9JCN9 74 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 HSD17B6O14756 317 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 OR5AC1P0C628 307 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 ATP1B2P14415 290 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-218ENST00000608440 LMO1P25800 156 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 AK4P27144 223 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-218ENST00000608440 SLC25A1P53007 311 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 CCL20P78556 96 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 PRAMEF14Q5SWL7 426 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 SLC35D2Q76EJ3 337 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 SMIM15Q7Z3B0 74 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 FAM174AQ8TBP5 190 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 BADQ92934 168 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 HIST1H2AAQ96QV6 131 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 RNF24Q9Y225 148 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 COL4A4P53420 1690 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-218ENST00000608440 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 CCDC85CA6NKD9 419 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 ELOA3DA6NLF2 546 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-218ENST00000608440 H3BNC9 293 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 DOK2O60496 412 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 SLCO2B1O94956 709 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 APODP05090 189 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 DANCRP0C864 163 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 NID1P14543 1247 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 HIST1H1CP16403 213 aaKnown RBP11.23□□□□□ -0.61
CTCFL-218ENST00000608440 HRH1P35367 487 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 TAF10Q12962 218 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 RAB11BQ15907 218 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 ELOA3BQ3SY89 546 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 PLEKHS1Q5SXH7 462 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 ELOA3Q8NG57 546 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 OR2L2Q8NH16 312 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 SLC2A12Q8TD20 617 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 TMEM239Q8WW34 195 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 ANKRD9Q96BM1 317 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-218ENST00000608440 BPIFA2Q96DR5 249 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 TNFRSF13CQ96RJ3 184 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 GINS3Q9BRX5 216 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 GSX1Q9H4S2 264 aaPredicted RBP11.23□□□□□ -0.61
CTCFL-218ENST00000608440 IL23AQ9NPF7 189 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 SIGLEC7Q9Y286 467 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 MYO16Q9Y6X6 1858 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 PLXNB3Q9ULL4 1909 aa11.23□□□□□ -0.61
CTCFL-218ENST00000608440 A0A087WWC5 75 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 KIR2DL5BA0A0G2JN68 375 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 KIR2DL5BA0A0G2JPC4 375 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 TMEM238C9JI98 176 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 M0QZ24 198 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 EFEMP2O95967 443 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 AGR2O95994 175 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 C8orf89P0DMQ9 161 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 CEACAM1P13688 526 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 ARRB1P49407 418 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-218ENST00000608440 H3F3AP84243 136 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 FAM3AP98173 230 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 SSBP1Q04837 148 aaKnown RBP11.22□□□□□ -0.61
CTCFL-218ENST00000608440 SLC8B1Q6J4K2 584 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 LCN10Q6JVE6 187 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 ZNF550Q7Z398 422 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 C7orf61Q8IZ16 206 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 KIR2DL5AQ8N109 375 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 LYG1Q8N1E2 194 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 ZNF676Q8N7Q3 588 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 ZNF480Q8WV37 535 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 ERGIC1Q969X5 290 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 CCDC74AQ96AQ1 378 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 PRSS27Q9BQR3 290 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-218ENST00000608440 FRRS1LQ9P0K9 344 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 GREB1Q4ZG55 1949 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 LOC100289279A0A1B0GTE1 492 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 PNPP00491 289 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 CATP04040 527 aaKnown RBP11.22□□□□□ -0.61
CTCFL-218ENST00000608440 SOD2P04179 222 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 CD46P15529 392 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 ALDH3B1P43353 468 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 IDH3GP51553 393 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-218ENST00000608440 UCP2P55851 309 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 VAMP2P63027 116 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 SPEM2Q0P670 501 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 CDKN3Q16667 212 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 HIKESHIQ53FT3 197 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 NUFIP2Q7Z417 695 aaKnown RBP11.22□□□□□ -0.61
CTCFL-218ENST00000608440 GRASPQ7Z6J2 395 aaPredicted RBP11.22□□□□□ -0.61
CTCFL-218ENST00000608440 CMTM1Q8IZ96 169 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 C2orf15Q8WU43 125 aaKnown RBP11.22□□□□□ -0.61
CTCFL-218ENST00000608440 PRAP1Q96NZ9 151 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 FKBP11Q9NYL4 201 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 SCN8AQ9UQD0 1980 aa11.22□□□□□ -0.61
CTCFL-218ENST00000608440 TLCD2A6NGC4 264 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms