RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 BHLHE40O14503 412 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 PPP1R3DO95685 299 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 PTBP3O95758 552 aaKnown RBP13.02□□□□□ -0.33
HDDC2-203ENST00000608284 MUC1P15941 1255 aaPredicted RBP13.02□□□□□ -0.33
HDDC2-203ENST00000608284 NAA10P41227 235 aaPredicted RBP13.02□□□□□ -0.33
HDDC2-203ENST00000608284 KRT72Q14CN4 511 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 TAF13Q15543 124 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 RSPO1Q2MKA7 263 aaPredicted RBP13.02□□□□□ -0.33
HDDC2-203ENST00000608284 BEAN1Q3B7T3 259 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 KRTAP27-1Q3LI81 207 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 SLC35E4Q6ICL7 350 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 CFAP77Q6ZQR2 320 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 NAA40Q86UY6 237 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 SLC7A13Q8TCU3 470 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 ZNF799Q96GE5 643 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 PPA2Q9H2U2 334 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 ZNRD1Q9P1U0 126 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 FBLN5Q9UBX5 448 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 KCNG2Q9UJ96 466 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 ENPP4Q9Y6X5 453 aa13.02□□□□□ -0.33
HDDC2-203ENST00000608284 A0A1W2PRQ8 180 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 MEIOCA2RUB1 952 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 ANKRD30BLA7E2S9 258 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 RNASEK-C17orf49H0YIS7 233 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 NPFFO15130 113 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 SLC6A6P31641 620 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 SLC7A2P52569 658 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 POU4F2Q12837 409 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 KLF10Q13118 480 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 BLMHQ13867 455 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 DGCR6Q14129 220 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 RFX4Q33E94 735 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 LRRC10Q5BKY1 277 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 METAP1DQ6UB28 335 aaPredicted RBP13.01□□□□□ -0.33
HDDC2-203ENST00000608284 CBLL1Q75N03 491 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 FAM90A1Q86YD7 464 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 OR6V1Q8N148 313 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 SLC26A10Q8NG04 563 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 FAM162AQ96A26 154 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 HSH2DQ96JZ2 352 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 OPA3Q9H6K4 179 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 RPRD1BQ9NQG5 326 aaKnown RBP13.01□□□□□ -0.33
HDDC2-203ENST00000608284 CYB5R1Q9UHQ9 305 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 N6AMT1Q9Y5N5 214 aa13.01□□□□□ -0.33
HDDC2-203ENST00000608284 IGHV3OR15-7A0A075B7D8 119 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 IGLV1-36A0A0B4J1U3 117 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 EDF1O60869 148 aaKnown RBP13□□□□□ -0.33
HDDC2-203ENST00000608284 SERPINA1P01009 418 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 DDOSTP39656 456 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 HOXA4Q00056 320 aaPredicted RBP13□□□□□ -0.33
HDDC2-203ENST00000608284 ZNF92Q03936 586 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 TEX36Q5VZQ5 186 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 NCR3LG1Q68D85 454 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 PGBD2Q6P3X8 592 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 ZNF826PQ6ZT77 177 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 LNX2Q8N448 690 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 GCSAMQ8N6F7 178 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 OR4S1Q8NGB4 309 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 OR4C13Q8NGP0 309 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 MRAPQ8TCY5 172 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 NMNAT3Q96T66 252 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 CCL13Q99616 98 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 IFT27Q9BW83 186 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 RNPEPL1Q9HAU8 725 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 RAB18Q9NP72 206 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13□□□□□ -0.33
HDDC2-203ENST00000608284 SIRT7Q9NRC8 400 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 DNAJB11Q9UBS4 358 aa13□□□□□ -0.33
HDDC2-203ENST00000608284 A0A1W2PRD5 423 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 A0A1W2PRF3 423 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 A0A1W2PRM7 423 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 HMGB1P1B2RPK0 211 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-203ENST00000608284 DCTN6O00399 190 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 NDUFAB1O14561 156 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 XPNPEP2O43895 674 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 GMNNO75496 209 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 LHBP01229 141 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 RHCEP18577 417 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 POU1F1P28069 291 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 OMPP47874 163 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 LOXL3P58215 753 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 SMIM11AP58511 58 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 LIPEQ05469 1076 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 KPRPQ5T749 579 aaPredicted RBP12.99□□□□□ -0.33
HDDC2-203ENST00000608284 DRAM2Q6UX65 266 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 DPY19L4Q7Z388 723 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 CPLX4Q7Z7G2 160 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 LY6G5BQ8NDX9 201 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 OR4K13Q8NH42 304 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 OR2T6Q8NHC8 308 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 FANK1Q8TC84 345 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 LRRC29Q8WV35 223 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 H1FXQ92522 213 aaKnown RBP12.99□□□□□ -0.33
HDDC2-203ENST00000608284 SGCDQ92629 289 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 CLPTM1LQ96KA5 538 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 COPS4Q9BT78 406 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 SP140LQ9H930 580 aa12.99□□□□□ -0.33
HDDC2-203ENST00000608284 ARPC3O15145 178 aa12.98□□□□□ -0.33
HDDC2-203ENST00000608284 IDH3BO43837 385 aa12.98□□□□□ -0.33
HDDC2-203ENST00000608284 TIPRLO75663 272 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms