RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 DAOP14920 347 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 VHLP40337 213 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 ACTA2P62736 377 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 ACTG2P63267 376 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 ZNF85Q03923 595 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 SNCBQ16143 134 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 SMN1Q16637 294 aaKnown RBP12.16□□□□□ -0.46
CTSA-211ENST00000606066 TMEM255AQ5JRV8 349 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 C6orf52Q5T4I8 152 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 IZUMO2Q6UXV1 221 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 SSX6Q7RTT6 188 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 EGFL6Q8IUX8 553 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 OR5AS1Q8N127 324 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 OR2AE1Q8NHA4 323 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 ITFG2Q969R8 447 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 REEP6Q96HR9 211 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 RHNO1Q9BSD3 238 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 PBOV1Q9GZY1 135 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 SLC22A4Q9H015 551 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 MSL2Q9HCI7 577 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 TMEM100Q9NV29 134 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 FAM206AQ9NX38 181 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 NOP16Q9Y3C1 178 aaKnown RBP12.16□□□□□ -0.46
CTSA-211ENST00000606066 SNX5Q9Y5X3 404 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 R4GMQ9 66 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 COL6A5A8TX70 2615 aa12.16□□□□□ -0.46
CTSA-211ENST00000606066 FN1P02751 2386 aaKnown RBP12.15□□□□□ -0.46
CTSA-211ENST00000606066 ZSCAN5BA6NJL1 495 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 CD300LBA8K4G0 201 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 LOC110117498-PIK3R3F6TDL0 507 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 MAGEB4O15481 346 aaPredicted RBP12.15□□□□□ -0.46
CTSA-211ENST00000606066 IGHV1-46P01743 117 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 IGHA1P01876 353 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 DCKP27707 260 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 MAGEB1P43366 347 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 PDLIM4P50479 330 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 CSNK2BP67870 215 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 MRPS11P82912 194 aaKnown RBP12.15□□□□□ -0.46
CTSA-211ENST00000606066 TSTQ16762 297 aaKnown RBP12.15□□□□□ -0.46
CTSA-211ENST00000606066 GFOD2Q3B7J2 385 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 ZNF684Q5T5D7 378 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 LIPNQ5VXI9 398 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 KRTAP1-3Q8IUG1 177 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 FTMTQ8N4E7 242 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 BHLHE23Q8NDY6 225 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 OR2Z1Q8NG97 314 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 OR8B12Q8NGG6 310 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 OR52I1Q8NGK6 324 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 UBASH3BQ8TF42 649 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 FBLIM1Q8WUP2 373 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 Q96MF0 132 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 SMR3AQ99954 134 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 SLC30A2Q9BRI3 323 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 SAP30LQ9HAJ7 183 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 NUFIP1Q9UHK0 495 aaKnown RBP12.15□□□□□ -0.46
CTSA-211ENST00000606066 GNG8Q9UK08 70 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 GTF2A1LQ9UNN4 478 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 ATRQ13535 2644 aa12.15□□□□□ -0.46
CTSA-211ENST00000606066 STAB1Q9NY15 2570 aa12.15□□□□□ -0.47
CTSA-211ENST00000606066 A0A0U1RQV5 110 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 LOC390937A0A1W2PQ73 354 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 C5orf63A6NC05 138 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 NDUFS8O00217 210 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 LY6HO94772 140 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 RPP14O95059 124 aaKnown RBP12.14□□□□□ -0.47
CTSA-211ENST00000606066 CD55P08174 381 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 CCL8P80075 99 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 TNFAIP6P98066 277 aaPredicted RBP12.14□□□□□ -0.47
CTSA-211ENST00000606066 FAM3AP98173 230 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 MED21Q13503 144 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 GALEQ14376 348 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 CDONQ4KMG0 1287 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 BCL2L15Q5TBC7 163 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 ZNF786Q8N393 782 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 ZNF525Q8N782 197 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 ZNF540Q8NDQ6 660 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 CSNK2A3Q8NEV1 391 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 FAM168AQ92567 244 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 GTF3AQ92664 365 aaKnown RBP12.14□□□□□ -0.47
CTSA-211ENST00000606066 RDH5Q92781 318 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 ELMOD3Q96FG2 381 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 SIGLEC11Q96RL6 698 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 ALG8Q9BVK2 526 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 FGF20Q9NP95 211 aaPredicted RBP12.14□□□□□ -0.47
CTSA-211ENST00000606066 CHCHD3Q9NX63 227 aaKnown RBP12.14□□□□□ -0.47
CTSA-211ENST00000606066 MRPL15Q9P015 296 aaKnown RBP12.14□□□□□ -0.47
CTSA-211ENST00000606066 ZNF319Q9P2F9 582 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 OR52A1Q9UKL2 312 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 MYRFQ9Y2G1 1151 aa12.14□□□□□ -0.47
CTSA-211ENST00000606066 CSPG4Q6UVK1 2322 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 hCG_38984A0A1B0GV85 526 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 EFCAB10A6NFE3 127 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 ANKRD30BLA7E2S9 258 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 FAM20BO75063 409 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 SRSF10O75494 262 aaKnown RBP12.13□□□□□ -0.47
CTSA-211ENST00000606066 MTRF1O75570 445 aaKnown RBP12.13□□□□□ -0.47
CTSA-211ENST00000606066 PNPP00491 289 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 HPXP02790 462 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 HEXAP06865 529 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 ATP6V1B1P15313 513 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms