RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 SLC16A9Q7RTY1 509 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 KRT77Q7Z794 578 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 OR56B2PQ8NGI1 322 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 TMEM163Q8TC26 289 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 TMEM186Q96B77 213 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 SGK3Q96BR1 496 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 REEP6Q96HR9 211 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 ADAT1Q9BUB4 502 aaKnown RBP12.15□□□□□ -0.46
TUBE1-208ENST00000604743 SP140LQ9H930 580 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 UFSP2Q9NUQ7 469 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 ENOPH1Q9UHY7 261 aa12.15□□□□□ -0.46
TUBE1-208ENST00000604743 H3BNX3 289 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 TMEM178BH3BS89 294 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 PLPP2O43688 288 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 IFNA2P01563 188 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 IGHV2-70P01814 119 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 FAM157CP0CG43 387 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 ANPEPP15144 967 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 ALOX5APP20292 161 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 SRP14P37108 136 aaKnown RBP12.14□□□□□ -0.47
TUBE1-208ENST00000604743 BTG1P62324 171 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 MAB21L1Q13394 359 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 ZMYND11Q15326 602 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 FAHD2BQ6P2I3 314 aaPredicted RBP12.14□□□□□ -0.47
TUBE1-208ENST00000604743 MEPCEQ7L2J0 689 aaKnown RBP12.14□□□□□ -0.47
TUBE1-208ENST00000604743 FAHD2AQ96GK7 314 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 SIGLEC11Q96RL6 698 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 RBM4BQ9BQ04 359 aaKnown RBP12.14□□□□□ -0.47
TUBE1-208ENST00000604743 OSBPL10Q9BXB5 764 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 YIPF3Q9GZM5 350 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 OR10A2Q9H208 303 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 OPA3Q9H6K4 179 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 ZNF319Q9P2F9 582 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 LRP12Q9Y561 859 aa12.14□□□□□ -0.47
TUBE1-208ENST00000604743 CUBNO60494 3623 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 ANKRD30BLA7E2S9 258 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 PCMT1P22061 227 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 PMELP40967 661 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 LCN2P80188 198 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 FAM3AP98173 230 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 FAM201AQ5SY85 155 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 AADACL4Q5VUY2 407 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 NXNL2Q5VZ03 156 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 ZFP1Q6P2D0 407 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 RHOUQ7L0Q8 258 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 PRSS45Q7RTY3 260 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 KLHL36Q8N4N3 616 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 SPICQ8N5J4 248 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 OR52H1Q8NGJ2 320 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 SPSB4Q96A44 273 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 RAB3IPQ96QF0 476 aaPredicted RBP12.13□□□□□ -0.47
TUBE1-208ENST00000604743 CNN2Q99439 309 aaKnown RBP12.13□□□□□ -0.47
TUBE1-208ENST00000604743 SLC22A4Q9H015 551 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 MRPL15Q9P015 296 aaKnown RBP12.13□□□□□ -0.47
TUBE1-208ENST00000604743 COPS3Q9UNS2 423 aa12.13□□□□□ -0.47
TUBE1-208ENST00000604743 A0A1B0GWJ7 208 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 SLC22A31A6NKX4 558 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 LRRC30A6NM36 301 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 IFNL4K9M1U5 179 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 EI24O14681 340 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 GMDSO60547 372 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 GRPP07492 148 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 IRF2P14316 349 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 CD200P41217 278 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 EFNB1P98172 346 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 MPPED2Q15777 294 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 ZIK1Q3SY52 487 aaPredicted RBP12.12□□□□□ -0.47
TUBE1-208ENST00000604743 KCTD18Q6PI47 426 aaPredicted RBP12.12□□□□□ -0.47
TUBE1-208ENST00000604743 LRRC28Q86X40 367 aaPredicted RBP12.12□□□□□ -0.47
TUBE1-208ENST00000604743 SLC35F2Q8IXU6 374 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 C10orf67Q8IYJ2 551 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 BOLLQ8N9W6 283 aaKnown RBP12.12□□□□□ -0.47
TUBE1-208ENST00000604743 C19orf18Q8NEA5 215 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 OR11L1Q8NGX0 322 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 GABARAPL3Q9BY60 117 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 MROQ9BYG7 248 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 IKZF2Q9UKS7 526 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 NOP16Q9Y3C1 178 aaKnown RBP12.12□□□□□ -0.47
TUBE1-208ENST00000604743 ORC6Q9Y5N6 252 aa12.12□□□□□ -0.47
TUBE1-208ENST00000604743 TRAV20A0A0B4J274 112 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.11□□□□□ -0.47
TUBE1-208ENST00000604743 hCG_38984A0A1B0GV85 526 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 A6NLC8 198 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 PRR32B1ATL7 298 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 MAGEB4O15481 346 aaPredicted RBP12.11□□□□□ -0.47
TUBE1-208ENST00000604743 FAM20BO75063 409 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 DDOSTP39656 456 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 MDH2P40926 338 aaKnown RBP12.11□□□□□ -0.47
TUBE1-208ENST00000604743 GSK3AP49840 483 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 PSMA6P60900 246 aaKnown RBP12.11□□□□□ -0.47
TUBE1-208ENST00000604743 CXCR4P61073 352 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 HOXA4Q00056 320 aaPredicted RBP12.11□□□□□ -0.47
TUBE1-208ENST00000604743 TMEM155Q4W5P6 130 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 GID4Q8IVV7 300 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 C1orf87Q8N0U7 546 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 MUC20Q8N307 709 aaPredicted RBP12.11□□□□□ -0.47
TUBE1-208ENST00000604743 RFLNBQ8N5W9 214 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 CELF2-AS1Q8N7Q2 184 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 OR8B12Q8NGG6 310 aa12.11□□□□□ -0.47
TUBE1-208ENST00000604743 OR51G2Q8NGK0 314 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms