RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 PTX4Q96A99 478 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 SPACA5Q96QH8 159 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 SSX3Q99909 188 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 GPR61Q9BZJ8 451 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 KIR3DX1Q9H7L2 352 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 RHBDD3Q9Y3P4 386 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 URGCP-MRPS24S4R325 110 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 ARHGEF17Q96PE2 2063 aaPredicted RBP11.08□□□□□ -0.64
CDCA3-212ENST00000604599 LOC390937A0A1W2PQ73 354 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 SDCBPO00560 298 aaPredicted RBP11.08□□□□□ -0.64
CDCA3-212ENST00000604599 ZNF264O43296 627 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 CD37P11049 281 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 GLRA1P23415 457 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 DDTP30046 118 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 TAS2R60P59551 318 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 BIKQ13323 160 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 EMC4Q5J8M3 183 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 C1QL3Q5VWW1 255 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 ZNF343Q6P1L6 599 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 GALNTL5Q7Z4T8 443 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 CA13Q8N1Q1 262 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 METTL21AQ8WXB1 218 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 ERGIC1Q969X5 290 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 RERGQ96A58 199 aaPredicted RBP11.08□□□□□ -0.64
CDCA3-212ENST00000604599 FGGYQ96C11 551 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 FAM212BQ9NTI7 297 aaPredicted RBP11.08□□□□□ -0.64
CDCA3-212ENST00000604599 SLC5A6Q9Y289 635 aa11.08□□□□□ -0.64
CDCA3-212ENST00000604599 LSM5Q9Y4Y9 91 aaKnown RBP11.08□□□□□ -0.64
CDCA3-212ENST00000604599 KNL1Q8NG31 2342 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 A0A087X0M5 115 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 A0A1B0GX30 115 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 METTL12A8MUP2 240 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 GPR89AB7ZAQ6 455 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 RAMP1O60894 148 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 SCGB1D2O95969 90 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 KNG1P01042 644 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 PRH1P02810 166 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 GPR89BP0CG08 455 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 PNMTP11086 282 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 CTLA4P16410 223 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 THBS4P35443 961 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 IAH1Q2TAA2 248 aaPredicted RBP11.07□□□□□ -0.64
CDCA3-212ENST00000604599 FAM78AQ5JUQ0 283 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 FIGLAQ6QHK4 219 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 REC114Q7Z4M0 266 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 BCORP1Q8N888 145 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 NKAIN3Q8N8D7 197 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 DTWD2Q8NBA8 298 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 C8orf44Q96CB5 159 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 GNRHR2Q96P88 292 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 RTBDNQ9BSG5 229 aaPredicted RBP11.07□□□□□ -0.64
CDCA3-212ENST00000604599 ZBP1Q9H171 429 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 SMOC1Q9H4F8 434 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 BTBD17A6NE02 478 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 ZNF726A6NNF4 738 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 TERTO14746 1132 aaKnown RBP11.07□□□□□ -0.64
CDCA3-212ENST00000604599 TBPP20226 339 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 CEBPGP53567 150 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 EMP2P54851 167 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 DEFB103AP81534 67 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 ROM1Q03395 351 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 IL15RAQ13261 267 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 AGBL4Q5VU57 503 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 CHRDL2Q6WN34 429 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 RD3Q7Z3Z2 195 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 RNF144BQ7Z419 303 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 LYPD6Q86Y78 171 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 ZNF101Q8IZC7 436 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 FAM3CQ92520 227 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 HOXB13Q92826 284 aaPredicted RBP11.07□□□□□ -0.64
CDCA3-212ENST00000604599 RAB7BQ96AH8 199 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 SLC25A36Q96CQ1 311 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 SUCNR1Q9BXA5 334 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 HDAC8Q9BY41 377 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 CNTNAP3Q9BZ76 1288 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 ADAM19Q9H013 955 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 DEC1Q9P2X7 70 aa11.07□□□□□ -0.64
CDCA3-212ENST00000604599 SLC35E2P0CK97 266 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 CT45A8P0DMV1 189 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 CT45A9P0DMV2 189 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 HPGDP15428 266 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 VIPR2P41587 438 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 INSM1Q01101 510 aaPredicted RBP11.06□□□□□ -0.64
CDCA3-212ENST00000604599 CT45A2Q5DJT8 189 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 RPUSD3Q6P087 351 aaKnown RBP11.06□□□□□ -0.64
CDCA3-212ENST00000604599 MED25Q71SY5 747 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 LINC00346Q8IVM7 164 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 RNASE11Q8TAA1 199 aaKnown RBP11.06□□□□□ -0.64
CDCA3-212ENST00000604599 CPNE4Q96A23 557 aaPredicted RBP11.06□□□□□ -0.64
CDCA3-212ENST00000604599 BSCL2Q96G97 398 aaPredicted RBP11.06□□□□□ -0.64
CDCA3-212ENST00000604599 G6PC3Q9BUM1 346 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 SLC35B3Q9H1N7 401 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 FGF22Q9HCT0 170 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 ADH1CP00326 375 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 F10P00742 488 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 SOD3P08294 240 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 LHX8Q68G74 356 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 C19orf47Q8N9M1 422 aaKnown RBP11.06□□□□□ -0.64
CDCA3-212ENST00000604599 FLVCR1-AS1Q8TAF5 88 aa11.06□□□□□ -0.64
CDCA3-212ENST00000604599 LIPHQ8WWY8 451 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms