RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 STRCQ7RTU9 1775 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 ABHD16AO95870 558 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 SEMG1P04279 462 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 CHRNA7P36544 502 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 PMP22Q01453 160 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 C19orf57Q0VDD7 668 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 MPPED2Q15777 294 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 MARCH1Q8TCQ1 289 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 BCORQ6W2J9 1755 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 TMED7-TICAM2A0A0A6YYA0 188 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 LOC105371267A0A1B0GV96 52 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 BCAT2O15382 392 aaPredicted RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 GABREP78334 506 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 PIGTQ969N2 578 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 SOX7Q9BT81 388 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 GABARAPL1Q9H0R8 117 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 TMED7Q9Y3B3 224 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 H3BVH4 76 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 DIO1P49895 249 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 PJVKQ0ZLH3 352 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 FFAR4Q5NUL3 377 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 SLCO4C1Q6ZQN7 724 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 BHLHE23Q8NDY6 225 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 NAT6Q93015 286 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 AMDHD1Q96NU7 426 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 SLC35B3Q9H1N7 401 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 PLEKHB1Q9UF11 243 aaPredicted RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 AVPR2P30518 371 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 PTGFRP43088 359 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 RUNX2Q13950 521 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 EDDM3AQ14507 147 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 OR6C1Q96RD1 312 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF2Q9BSG1 426 aaPredicted RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 TRAV36DV7A0A075B6V5 113 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 GSTP1P09211 210 aaKnown RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 NKX2-1P43699 371 aaPredicted RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 NOVA1P51513 510 aaKnown RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 TCTAP57738 103 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 ERVS71-1P61550 626 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 GLDNQ6ZMI3 551 aaPredicted RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 TCTEX1D1Q8N7M0 179 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 DUSP18Q8NEJ0 188 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 KLHDC9Q8NEP7 349 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 ACTR3CQ9C0K3 210 aaPredicted RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 CHD3Q12873 2000 aaKnown RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 ARFGEF3Q5TH69 2177 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 TEX50A0A1B0GTY4 177 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 EIF3GO75821 320 aaKnown RBP eCLIP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF750Q32MQ0 723 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 TGIF2LXQ8IUE1 241 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 HOXC13P31276 330 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 CRMP1Q14194 572 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 ATG101Q9BSB4 218 aa7.92□□□□□ -1.14
CSMD1-216ENST00000602557 NOSIPQ9Y314 301 aaKnown RBP7.92□□□□□ -1.14
CSMD1-216ENST00000602557 OR2J2O76002 312 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 CR2P20023 1033 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 CSNK1DP48730 415 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 ERVFC1-1P60608 527 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 NHLH2Q02577 135 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 MFAP5Q13361 173 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 MCHR2Q969V1 340 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 ORAI1Q96D31 301 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 DDA1Q9BW61 102 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 A0A1W2PPE2 198 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 RPL11P62913 178 aaKnown RBP7.91□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF485Q8NCK3 441 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 PDLIM5Q96HC4 596 aaKnown RBP7.91□□□□□ -1.14
CSMD1-216ENST00000602557 GSX1Q9H4S2 264 aaPredicted RBP7.91□□□□□ -1.14
CSMD1-216ENST00000602557 ISG20L2Q9H9L3 353 aaKnown RBP7.91□□□□□ -1.14
CSMD1-216ENST00000602557 NAT8BQ9UHF3 227 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 PGBD5Q8N414 524 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 C2orf50Q96LR7 162 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 C12orf49Q9H741 205 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 YTHDF2Q9Y5A9 579 aaKnown RBP7.91□□□□□ -1.14
CSMD1-216ENST00000602557 USP3Q9Y6I4 520 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 MED13LQ71F56 2210 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.91□□□□□ -1.14
CSMD1-216ENST00000602557 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.91□□□□□ -1.14
CSMD1-216ENST00000602557 DCDP81605 110 aaKnown RBP7.91□□□□□ -1.14
CSMD1-216ENST00000602557 DLEU7Q6UYE1 221 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 TMEM9BQ9NQ34 198 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 HS3ST2Q9Y278 367 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF814B7Z6K7 855 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 DDTP30046 118 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF835Q9Y2P0 537 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 TCRBV5S2A0A599 114 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 CLEC3BP05452 202 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 GLULP15104 373 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 ABCD3P28288 659 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 UBE2G1P62253 170 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 ELAVL1Q15717 326 aaKnown RBP7.91□□□□□ -1.14
CSMD1-216ENST00000602557 ADAMTSL4Q6UY14 1074 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 DCXRQ7Z4W1 244 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 CATSPERDQ86XM0 798 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 NKAIN3Q8N8D7 197 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 KLK11Q9UBX7 282 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 PKDREJQ9NTG1 2253 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 DTYMKP23919 212 aa7.91□□□□□ -1.14
CSMD1-216ENST00000602557 TNFRSF4P43489 277 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms