RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 POU2F3Q9UKI9 436 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 CMAHPQ9Y471 501 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 RNF115Q9Y4L5 304 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 TIMM10BQ9Y5J6 103 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 CENPEQ02224 2701 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 LRBAP50851 2863 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 PLCE1Q9P212 2302 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 MYO9AB2RTY4 2548 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 ITPR2Q14571 2701 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 TRBV5-7A0A0A0MS05 114 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 A0A0G2JK05 382 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 DEFB108AA8MXU0 73 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 ZNF878C9JN71 531 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 LOC110117498-PIK3R3F6TDL0 507 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 CTDSP2O14595 271 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 ABCD4O14678 606 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 PDCD5O14737 125 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 TMEM127O75204 238 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 CTAG2O75638 210 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 NCR1O76036 304 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 RAF1P04049 648 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 SERPINA5P05154 406 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 ZNF32P17041 273 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 RAB3BP20337 219 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 CD40P25942 277 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 APLNRP35414 380 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 MMP16P51512 607 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 CAV3P56539 151 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 PPP3R1P63098 170 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 GALK2Q01415 458 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 MFGE8Q08431 387 aaPredicted RBP8.74□□□□□ -1.01
UPF1-213ENST00000601981 TBC1D28Q2M2D7 210 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 SFXN4Q6P4A7 337 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 MZT2AQ6P582 158 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 CORO6Q6QEF8 472 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 SLC22A25Q6T423 547 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 SEZ6L2Q6UXD5 910 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 C22orf34Q6ZV56 151 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 SPATC1Q76KD6 591 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.74□□□□□ -1.01
UPF1-213ENST00000601981 GJC3Q8NFK1 279 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 OR10S1Q8NGN2 331 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 ATF6BQ99941 703 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 SLC30A2Q9BRI3 323 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 ZNF416Q9BWM5 594 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 ZCCHC4Q9H5U6 513 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 MOB1AQ9H8S9 216 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 CDH20Q9HBT6 801 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 NOX4Q9NPH5 578 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 B3GNT2Q9NY97 397 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 NPAP1Q9NZP6 1156 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 SPEF1Q9Y4P9 236 aa8.74□□□□□ -1.01
UPF1-213ENST00000601981 DSCAMO60469 2012 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 IGHV1-18A0A0C4DH31 117 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 SMIM30A4D0T7 59 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 FAM221AA4D161 298 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 DPRXA6NFQ7 191 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 ACOD1A6NK06 481 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 NOTOA8MTQ0 251 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 VSTM5A8MXK1 200 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 PIN1P1O15428 100 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 RGS5O15539 181 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 SGCEO43556 437 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 DOK2O60496 412 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 PNPP00491 289 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 IGLV1-44P01699 117 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 ISG15P05161 165 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 MMP7P09237 267 aaPredicted RBP8.73□□□□□ -1.01
UPF1-213ENST00000601981 CECR9P0C854 216 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 OCM2P0CE71 109 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 UBCP0CG48 685 aaKnown RBP8.73□□□□□ -1.01
UPF1-213ENST00000601981 ACHEP22303 614 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 TNFSF8P32971 234 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 PSMA6P60900 246 aaKnown RBP8.73□□□□□ -1.01
UPF1-213ENST00000601981 GRB2P62993 217 aaKnown RBP8.73□□□□□ -1.01
UPF1-213ENST00000601981 HIST1H3AP68431 136 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 NAAAQ02083 359 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 ENDOGQ14249 297 aaKnown RBP8.73□□□□□ -1.01
UPF1-213ENST00000601981 PABPC1L2AQ5JQF8 200 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 HIST2H3PS2Q5TEC6 136 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 ZNF704Q6ZNC4 412 aaPredicted RBP8.73□□□□□ -1.01
UPF1-213ENST00000601981 CFAP77Q6ZQR2 320 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 HIST2H3AQ71DI3 136 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 NR2C2APQ86WQ0 139 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 LAX1Q8IWV1 398 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 HTRA1Q92743 480 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 OR2H1Q9GZK4 316 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 HDHD2Q9H0R4 259 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 SLITRK2Q9H156 845 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 MIXL1Q9H2W2 232 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 PNRC2Q9NPJ4 139 aaKnown RBP8.73□□□□□ -1.01
UPF1-213ENST00000601981 G6PC2Q9NQR9 355 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 CENPMQ9NSP4 180 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 DDX28Q9NUL7 540 aaKnown RBP8.73□□□□□ -1.01
UPF1-213ENST00000601981 FAIMQ9NVQ4 179 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 PLEK2Q9NYT0 353 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 ZNF224Q9NZL3 707 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 ASH2LQ9UBL3 628 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 ATPIF1Q9UII2 106 aa8.73□□□□□ -1.01
UPF1-213ENST00000601981 ADAM30Q9UKF2 790 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms