RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 BOD1Q96IK1 185 aa17.5■□□□□ 0.39
PNKP-214ENST00000600573 PLEKHA1Q9HB21 404 aa17.5■□□□□ 0.39
PNKP-214ENST00000600573 TMEM138Q9NPI0 162 aa17.5■□□□□ 0.39
PNKP-214ENST00000600573 PRSS50Q9UI38 385 aa17.5■□□□□ 0.39
PNKP-214ENST00000600573 DNAJC13O75165 2243 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 FAM240BA0A1B0GVZ2 78 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 MBD3L4A6NDZ8 208 aaPredicted RBP17.49■□□□□ 0.39
PNKP-214ENST00000600573 MBD3L3A6NE82 208 aaPredicted RBP17.49■□□□□ 0.39
PNKP-214ENST00000600573 MBD3L5A6NJ08 208 aaPredicted RBP17.49■□□□□ 0.39
PNKP-214ENST00000600573 BOLA2-SMG1P6H3BVE0 249 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 CDK2P24941 298 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 PLP2Q04941 152 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 RNASE12Q5GAN4 147 aaKnown RBP17.49■□□□□ 0.39
PNKP-214ENST00000600573 PABPC1L2AQ5JQF8 200 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 ZNF529Q6P280 563 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 ZNF585AQ6P3V2 769 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 PLET1Q6UQ28 207 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 TFAP2EQ6VUC0 442 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 OR1M1Q8NGA1 313 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 OR51D1Q8NGF3 324 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 MBD3L2Q8NHZ7 208 aaPredicted RBP17.49■□□□□ 0.39
PNKP-214ENST00000600573 ADAT3Q96EY9 351 aaPredicted RBP17.49■□□□□ 0.39
PNKP-214ENST00000600573 C7orf50Q9BRJ6 194 aaKnown RBP17.49■□□□□ 0.39
PNKP-214ENST00000600573 MMP28Q9H239 520 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 NPAP1Q9NZP6 1156 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 RAXQ9Y2V3 346 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 N6AMT1Q9Y5N5 214 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 CACNG2Q9Y698 323 aa17.49■□□□□ 0.39
PNKP-214ENST00000600573 GABARAPH6UMI1 98 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 DHRS3O75911 302 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 ALX3O95076 343 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 CD3GP09693 182 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 RAB3AP20336 220 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 PTH2RP49190 550 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 TAS2R20P59543 309 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 GPR176Q14439 515 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 C1orf100Q5SVJ3 147 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 Q6ZT83 130 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 TOMM5Q8N4H5 51 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 JAGN1Q8N5M9 183 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 C9orf106Q8NAJ2 232 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 DUSP18Q8NEJ0 188 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 OR14K1Q8NGZ2 314 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 AKR7LQ8NHP1 331 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 BCL2L2Q92843 193 aaPredicted RBP17.48■□□□□ 0.39
PNKP-214ENST00000600573 SLC25A28Q96A46 364 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 SORCS2Q96PQ0 1159 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 PLSCR4Q9NRQ2 329 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 ZNF319Q9P2F9 582 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 CGGBP1Q9UFW8 167 aaPredicted RBP17.48■□□□□ 0.39
PNKP-214ENST00000600573 V9GYS6 101 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 CELSR3Q9NYQ7 3312 aa17.48■□□□□ 0.39
PNKP-214ENST00000600573 CENPXA8MT69 81 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 WISP2O76076 250 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 ALDOBP05062 364 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 GLYATL3Q5SZD4 288 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 AGAP6Q5VW22 663 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 PP6455Q8WZ26 134 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 UQCC2Q9BRT2 126 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 ZNF224Q9NZL3 707 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 TMEM272A0A1B0GTI8 110 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 IL18BPO95998 194 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 FAM157BP0CG42 384 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 THBS4P35443 961 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 KIR2DL2P43627 348 aaPredicted RBP17.47■□□□□ 0.39
PNKP-214ENST00000600573 RAB1AP62820 205 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 C2orf76Q3KRA6 126 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 RSBN1Q5VWQ0 802 aaPredicted RBP17.47■□□□□ 0.39
PNKP-214ENST00000600573 KRT74Q7RTS7 529 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 AKAP14Q86UN6 197 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 C1orf162Q8NEQ5 155 aaPredicted RBP17.47■□□□□ 0.39
PNKP-214ENST00000600573 FGFBP3Q8TAT2 258 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 FAM57AQ8TBR7 257 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 ITPKCQ96DU7 683 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 FAM71F1Q96KD3 344 aaPredicted RBP17.47■□□□□ 0.39
PNKP-214ENST00000600573 AUNIPQ9H7T9 357 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 NEK6Q9HC98 313 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 DIABLOQ9NR28 239 aa17.47■□□□□ 0.39
PNKP-214ENST00000600573 SPTBN2O15020 2390 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 A0A096LPE4 126 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 A0A1W2PPZ6 126 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 XRCC3O43542 346 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 XRCC2O43543 280 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 CTAG2O75638 210 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 LCATP04180 440 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 DBHP09172 617 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 PATE4P0C8F1 98 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 TIMP3P35625 211 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 PER3P56645 1201 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 CXADRP78310 365 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 C1orf185Q5T7R7 199 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 NAA40Q86UY6 237 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 OR13C9Q8NGT0 318 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 FCAMRQ8WWV6 532 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 AKAP1Q92667 903 aaKnown RBP eCLIP17.46■□□□□ 0.39
PNKP-214ENST00000600573 PHF21AQ96BD5 680 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 SGK3Q96BR1 496 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 C1QTNF5Q9BXJ0 243 aa17.46■□□□□ 0.39
PNKP-214ENST00000600573 METTL17Q9H7H0 456 aaPredicted RBP17.46■□□□□ 0.39
PNKP-214ENST00000600573 SPTBN4Q9H254 2564 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms