RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	TPBG	Q13641	420 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	DOC2B	Q14184	412 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	TST	Q16762	297 aa	Known RBP	18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	TMEM244	Q5VVB8	128 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	DMKN	Q6E0U4	476 aa	Predicted RBP	18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	TUBG2	Q9NRH3	451 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	ZNF391	Q9UJN7	358 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	STARD10	Q9Y365	291 aa		18.87	■□□□□ 0.61
LTBP4-227	ENST00000600026	CSMD1	Q96PZ7	3565 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026		A0A0U1RQV5	110 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	OR4C45	A6NMZ5	311 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	PLPP2	O43688	288 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	NGF	P01138	241 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	TTR	P02766	147 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	CPE	P16870	476 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	APOBEC3A	P31941	199 aa	Predicted RBP	18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	PPP1CB	P62140	327 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	RPS23	P62266	143 aa	Known RBP	18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	SLC3A1	Q07837	685 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	ADIPOQ	Q15848	244 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	ODF4	Q2M2E3	257 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	GFOD2	Q3B7J2	385 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	SNAI3	Q3KNW1	292 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	LIPK	Q5VXJ0	399 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	COMMD2	Q86X83	199 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	OR1J1	Q8NGS3	322 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	RPS4Y2	Q8TD47	263 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	TMEM171	Q8WVE6	324 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	PPP1R14A	Q96A00	147 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	RGCC	Q9H4X1	137 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	FAIM	Q9NVQ4	179 aa		18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	SIRT4	Q9Y6E7	314 aa	Predicted RBP	18.86	■□□□□ 0.61
LTBP4-227	ENST00000600026	SOD3	P08294	240 aa		18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	CFL1	P23528	166 aa	Known RBP	18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	TTK	P33981	857 aa		18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	GP2	P55259	537 aa	Known RBP	18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	ERVS71-1	P61550	626 aa		18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	MSMP	Q1L6U9	139 aa		18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	FBXL14	Q8N1E6	418 aa		18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	OPA3	Q9H6K4	179 aa		18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	PTTG3P	Q9NZH4	202 aa		18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	ZNF319	Q9P2F9	582 aa		18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	PLEKHA6	Q9Y2H5	1048 aa		18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	APC	P25054	2843 aa		18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026	ABCA12	Q86UK0	2595 aa		18.85	■□□□□ 0.61
LTBP4-227	ENST00000600026		A0A1B0GVI7	797 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	P2RY10	O00398	339 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	CCRL2	O00421	344 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	ZFPL1	O95159	310 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	RAF1	P04049	648 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	OR4A8	P0C604	315 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	CD53	P19397	219 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	RPL5	P46777	297 aa	Known RBP	18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	GLYATL3	Q5SZD4	288 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	RGS7BP	Q6MZT1	257 aa	Predicted RBP	18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	MUC15	Q8N387	334 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	OR51E1	Q8TCB6	317 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	GHSR	Q92847	366 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	SGK3	Q96BR1	496 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	REEP6	Q96HR9	211 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	CCL19	Q99731	98 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	PDCD1LG2	Q9BQ51	273 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	LAMP3	Q9UQV4	416 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	ZNF281	Q9Y2X9	895 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	CMAHP	Q9Y471	501 aa		18.84	■□□□□ 0.61
LTBP4-227	ENST00000600026	C5orf63	A6NC05	138 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	VSTM5	A8MXK1	200 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	ISG15	P05161	165 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	TFAP2A	P05549	437 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	ACHE	P22303	614 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	TRAM1	Q15629	374 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	ZNF718	Q3SXZ3	478 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	MRPL21	Q7Z2W9	205 aa	Known RBP	18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	CDH24	Q86UP0	819 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	DTX2	Q86UW9	622 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	PHC2	Q8IXK0	858 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	MS4A15	Q8N5U1	240 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	CCDC54	Q8NEL0	328 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	OR2AE1	Q8NHA4	323 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	SLC25A40	Q8TBP6	338 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	IGFBPL1	Q8WX77	278 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	MRPL24	Q96A35	216 aa	Known RBP	18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	TRAF4	Q9BUZ4	470 aa	Predicted RBP	18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	GPR84	Q9NQS5	396 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	FZR1	Q9UM11	496 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	HHLA2	Q9UM44	414 aa		18.83	■□□□□ 0.6
LTBP4-227	ENST00000600026	AKAP6	Q13023	2319 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	LOC107986453	A0A1B0GWG9	222 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026		H3BSA7	217 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	SYT7	O43581	403 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	MTRF1	O75570	445 aa	Known RBP	18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	CD8A	P01732	235 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	ZNF12	P17014	697 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	ANOS1	P23352	680 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	PSMA1	P25786	263 aa	Known RBP	18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	GCH1	P30793	250 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	SERPINF1	P36955	418 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	ALDH3B2	P48448	385 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	YIF1B	Q5BJH7	314 aa		18.82	■□□□□ 0.6
LTBP4-227	ENST00000600026	SPATA46	Q5T0L3	261 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms