RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ASB17Q8WXJ9 295 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 SPSB4Q96A44 273 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 GAL3ST1Q99999 423 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 MROQ9BYG7 248 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 GCM1Q9NP62 436 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 NPTNQ9Y639 398 aa23.81■■□□□ 1.4
SSBP4-206ENST00000599699 CFL1P23528 166 aaKnown RBP23.8■■□□□ 1.4
SSBP4-206ENST00000599699 LMO4P61968 165 aa23.8■■□□□ 1.4
SSBP4-206ENST00000599699 SLC35F2Q8IXU6 374 aa23.8■■□□□ 1.4
SSBP4-206ENST00000599699 ADAT1Q9BUB4 502 aaKnown RBP23.8■■□□□ 1.4
SSBP4-206ENST00000599699 ZNF665Q9H7R5 613 aa23.8■■□□□ 1.4
SSBP4-206ENST00000599699 LPAR2Q9HBW0 351 aa23.8■■□□□ 1.4
SSBP4-206ENST00000599699 MRPL15Q9P015 296 aaKnown RBP23.8■■□□□ 1.4
SSBP4-206ENST00000599699 WARS2Q9UGM6 360 aaKnown RBP23.8■■□□□ 1.4
SSBP4-206ENST00000599699 IKZF2Q9UKS7 526 aa23.8■■□□□ 1.4
SSBP4-206ENST00000599699 COPS3Q9UNS2 423 aa23.8■■□□□ 1.4
SSBP4-206ENST00000599699 A0A1B0GWJ7 208 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 B4DSR2 109 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 SBK2P0C263 348 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 MMP16P51512 607 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 PSMA6P60900 246 aaKnown RBP23.79■■□□□ 1.4
SSBP4-206ENST00000599699 ZBTB49Q6ZSB9 765 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 MOGAT3Q86VF5 341 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 OR51G2Q8NGK0 314 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 ZNF420Q8TAQ5 688 aaPredicted RBP23.79■■□□□ 1.4
SSBP4-206ENST00000599699 EME1Q96AY2 570 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 RAB39BQ96DA2 213 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 C1orf159Q96HA4 380 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 ADGRL4Q9HBW9 690 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 UBAP1Q9NZ09 502 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 ZNF319Q9P2F9 582 aa23.79■■□□□ 1.4
SSBP4-206ENST00000599699 ANKRD30BLA7E2S9 258 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 FAM157AC9JC47 383 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 IFNL4K9M1U5 179 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 GMDSO60547 372 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 DDOSTP39656 456 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 FAM3AP98173 230 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 CHRFAM7AQ494W8 412 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 DEGS2Q6QHC5 323 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 MNTQ99583 582 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 RGCCQ9H4X1 137 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 HAO2Q9NYQ3 351 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 CDC42EP3Q9UKI2 254 aa23.78■■□□□ 1.4
SSBP4-206ENST00000599699 ZNF670-ZNF695F2Z2N8 137 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 HTR1FP30939 366 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 ATP6V1E1P36543 226 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 CXCR4P61073 352 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 ZNF322Q6U7Q0 402 aaPredicted RBP23.77■■□□□ 1.4
SSBP4-206ENST00000599699 ZNF679Q8IYX0 411 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 DVL3Q92997 716 aaPredicted RBP23.77■■□□□ 1.4
SSBP4-206ENST00000599699 RFKQ969G6 155 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 HRASLS5Q96KN8 279 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 OR8B4Q96RC9 309 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 BEX2Q9BXY8 128 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 SHARPINQ9H0F6 387 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 CLN6Q9NWW5 311 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 TMEM160Q9NX00 188 aa23.77■■□□□ 1.4
SSBP4-206ENST00000599699 DYSFO75923 2080 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP23.76■■□□□ 1.39
SSBP4-206ENST00000599699 LRRC30A6NM36 301 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 TMEM178BH3BS89 294 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 PHYHO14832 338 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 ZNF254O75437 659 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 CD200P41217 278 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 GSK3AP49840 483 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 RIDAP52758 137 aaKnown RBP23.76■■□□□ 1.39
SSBP4-206ENST00000599699 ROM1Q03395 351 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 MAB21L1Q13394 359 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 RFLNBQ8N5W9 214 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 CELF2-AS1Q8N7Q2 184 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 TRUB1Q8WWH5 349 aaKnown RBP23.76■■□□□ 1.39
SSBP4-206ENST00000599699 SLC29A1Q99808 456 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 PCDHB10Q9UN67 800 aa23.76■■□□□ 1.39
SSBP4-206ENST00000599699 MALRD1Q5VYJ5 2156 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.75■■□□□ 1.391e-12■■□□□ 13.4
SSBP4-206ENST00000599699 TANC2Q9HCD6 1990 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 hCG_38984A0A1B0GV85 526 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 TMEM269A0A1B0GVZ9 245 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 PRR32B1ATL7 298 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 CYB5R3P00387 301 aaPredicted RBP23.75■■□□□ 1.39
SSBP4-206ENST00000599699 IGHV2-70P01814 119 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 IGHV2-5P01817 119 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 ANPEPP15144 967 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 BTG1P62324 171 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 POU4F2Q12837 409 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 PRAMEF6Q5VXH4 476 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 GLCCI1Q86VQ1 547 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 OR8B12Q8NGG6 310 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 OR51F2Q8NH61 342 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 UBE2FQ969M7 185 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 SIGLEC11Q96RL6 698 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 MBOAT4Q96T53 435 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 TBX5Q99593 518 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 UFSP2Q9NUQ7 469 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 LPAR3Q9UBY5 353 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 GMPPBQ9Y5P6 360 aa23.75■■□□□ 1.39
SSBP4-206ENST00000599699 ANK3Q12955 4377 aaKnown RBP23.74■■□□□ 1.39
SSBP4-206ENST00000599699 APOL3O95236 402 aa23.74■■□□□ 1.39
SSBP4-206ENST00000599699 MSMBP08118 114 aa23.74■■□□□ 1.39
SSBP4-206ENST00000599699 IRF2P14316 349 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms