RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 OR8S1Q8NH09 359 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 OTOSQ8NHW6 89 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 RNF133Q8WVZ7 376 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 DUS3LQ96G46 650 aaKnown RBP11.94□□□□□ -0.5
LIG1-218ENST00000599322 ADAT1Q9BUB4 502 aaKnown RBP11.94□□□□□ -0.5
LIG1-218ENST00000599322 OSBPL10Q9BXB5 764 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 YIPF3Q9GZM5 350 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 RGCCQ9H4X1 137 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 MARCH7Q9H992 704 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 NTN4Q9HB63 628 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 MRPL15Q9P015 296 aaKnown RBP11.94□□□□□ -0.5
LIG1-218ENST00000599322 PPIAL4EA0A075B759 164 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 PPIAL4DF5H284 164 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 PLPP2O43688 288 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 IGHV2-70P01814 119 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 HLA-DPB1P04440 258 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 PPIAL4FP0DN26 164 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 SLC2A1P11166 492 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 CA6P23280 308 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 NAA10P41227 235 aaPredicted RBP11.93□□□□□ -0.5
LIG1-218ENST00000599322 MMP16P51512 607 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 ZNF181Q2M3W8 571 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 GFOD2Q3B7J2 385 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 ESCO2Q56NI9 601 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 FAM57BQ71RH2 274 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 NLRC3Q7RTR2 1065 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 SLC16A9Q7RTY1 509 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 AMIGO2Q86SJ2 522 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 TIGD4Q8IY51 512 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 PLPP7Q8NBV4 271 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 CSNK2A3Q8NEV1 391 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 OR2AE1Q8NHA4 323 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 CENPNQ96H22 339 aaPredicted RBP11.93□□□□□ -0.5
LIG1-218ENST00000599322 REEP6Q96HR9 211 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 MROQ9BYG7 248 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 PATZ1Q9HBE1 687 aaKnown RBP11.93□□□□□ -0.5
LIG1-218ENST00000599322 BRD7Q9NPI1 651 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 TRIM36Q9NQ86 728 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 DNAJC27Q9NZQ0 273 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 ZNF391Q9UJN7 358 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 PPIAL4AQ9Y536 164 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 STAB1Q9NY15 2570 aa11.93□□□□□ -0.5
LIG1-218ENST00000599322 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.93□□□□□ -0.59e-8■■■■■ 29.1
LIG1-218ENST00000599322 SLC22A31A6NKX4 558 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 H0YL77 283 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 MLNRO43193 412 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 SELENOFO60613 162 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 CD200P41217 278 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 ZNF121P58317 390 aaPredicted RBP11.92□□□□□ -0.5
LIG1-218ENST00000599322 ZFP1Q6P2D0 407 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 RFLNBQ8N5W9 214 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 ZNF420Q8TAQ5 688 aaPredicted RBP11.92□□□□□ -0.5
LIG1-218ENST00000599322 ASB17Q8WXJ9 295 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 LRTOMTQ8WZ04 291 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 HIST1H2AAQ96QV6 131 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 TEAD3Q99594 435 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 ABCB9Q9NP78 766 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 MIOXQ9UGB7 285 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 OR5V1Q9UGF6 321 aa11.92□□□□□ -0.5
LIG1-218ENST00000599322 IGHV3-64DA0A0J9YX35 117 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 A6NLC8 198 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 ANXA2P2A6NMY6 339 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 PHYHO14832 338 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 CYB5R3P00387 301 aaPredicted RBP11.91□□□□□ -0.5
LIG1-218ENST00000599322 RPS2P15880 293 aaKnown RBP11.91□□□□□ -0.5
LIG1-218ENST00000599322 OPRL1P41146 370 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 GATA4P43694 442 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 PRSS12P56730 875 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 LCN2P80188 198 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 SPRNQ5BIV9 151 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 DEGS2Q6QHC5 323 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 GID4Q8IVV7 300 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 OR56B2PQ8NGI1 322 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 NANPQ8TBE9 248 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 ITFG2Q969R8 447 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 RAB3IPQ96QF0 476 aaPredicted RBP11.91□□□□□ -0.5
LIG1-218ENST00000599322 CNN2Q99439 309 aaKnown RBP11.91□□□□□ -0.5
LIG1-218ENST00000599322 MNTQ99583 582 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 RBM4BQ9BQ04 359 aaKnown RBP11.91□□□□□ -0.5
LIG1-218ENST00000599322 GABARAPL1Q9H0R8 117 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 C7orf69Q9H7B7 122 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 METTL17Q9H7H0 456 aaPredicted RBP11.91□□□□□ -0.5
LIG1-218ENST00000599322 UFSP2Q9NUQ7 469 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 RNF7Q9UBF6 113 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 LRCH1Q9Y2L9 728 aa11.91□□□□□ -0.5
LIG1-218ENST00000599322 PPIAL4CA0A0B4J2A2 164 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 hCG_1807616A0A1W2PRN6 198 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 ACOD1A6NK06 481 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 PHF1O43189 567 aaPredicted RBP11.9□□□□□ -0.5
LIG1-218ENST00000599322 TCF21O43680 179 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 ZNF254O75437 659 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 FSTL3O95633 263 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 GRPP07492 148 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 ATP6V1E1P36543 226 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 GNB2P62879 340 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 IL5RAQ01344 420 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 ZMYND11Q15326 602 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 SLX4IPQ5VYV7 408 aa11.9□□□□□ -0.5
LIG1-218ENST00000599322 KDM4DQ6B0I6 523 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms