RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 PTBP3O95758 552 aaKnown RBP14.11□□□□□ -0.15
PNKP-210ENST00000597965 ZNF823P16415 610 aa14.11□□□□□ -0.15
PNKP-210ENST00000597965 CA6P23280 308 aa14.11□□□□□ -0.15
PNKP-210ENST00000597965 FXYD6P3P58550 94 aa14.11□□□□□ -0.15
PNKP-210ENST00000597965 HACD2Q6Y1H2 254 aa14.11□□□□□ -0.15
PNKP-210ENST00000597965 CFAP77Q6ZQR2 320 aa14.11□□□□□ -0.15
PNKP-210ENST00000597965 SCCPDHQ8NBX0 429 aa14.11□□□□□ -0.15
PNKP-210ENST00000597965 TAF15Q92804 592 aaKnown RBP eCLIP14.11□□□□□ -0.15
PNKP-210ENST00000597965 ZNF799Q96GE5 643 aa14.11□□□□□ -0.15
PNKP-210ENST00000597965 DMRTB1Q96MA1 342 aa14.11□□□□□ -0.15
PNKP-210ENST00000597965 ADAT1Q9BUB4 502 aaKnown RBP14.11□□□□□ -0.15
PNKP-210ENST00000597965 RPRD1BQ9NQG5 326 aaKnown RBP14.11□□□□□ -0.15
PNKP-210ENST00000597965 C14orf119Q9NWQ9 140 aa14.11□□□□□ -0.15
PNKP-210ENST00000597965 IGHV1-69DA0A0B4J2H0 117 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 TRBV4-1A0A0J9YWV2 114 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 GGT3PA6NGU5 568 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 IGHV1-69P01742 117 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 SFTPBP07988 381 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 MMP9P14780 707 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 MXRA7P84157 204 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 RIPK1Q13546 671 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 MPPED2Q15777 294 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 TAF9Q16594 264 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 PRAMEF6Q5VXH4 476 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 SFRP4Q6FHJ7 346 aaPredicted RBP14.1□□□□□ -0.15
PNKP-210ENST00000597965 DRAM2Q6UX65 266 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 LINC00346Q8IVM7 164 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 OR52J3Q8NH60 311 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 NPRL2Q8WTW4 380 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 DHRS1Q96LJ7 313 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 IFT27Q9BW83 186 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 OR52D1Q9H346 318 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 FAM96BQ9Y3D0 163 aa14.1□□□□□ -0.15
PNKP-210ENST00000597965 VWFP04275 2813 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 BTBD17A6NE02 478 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 C3orf80F5H4A9 247 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 GADD45GO95257 159 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 HIST1H1CP16403 213 aaKnown RBP14.09□□□□□ -0.15
PNKP-210ENST00000597965 GRK5P34947 590 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 NUDT2P50583 147 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 RELBQ01201 579 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 RUSC1-AS1Q66K80 236 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 LDLRAD3Q86YD5 345 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 ARHGAP24Q8N264 748 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 BOLLQ8N9W6 283 aaKnown RBP14.09□□□□□ -0.15
PNKP-210ENST00000597965 C19orf18Q8NEA5 215 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 OR4K13Q8NH42 304 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 MCUR1Q96AQ8 359 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 TBX15Q96SF7 602 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 SPAG4Q9NPE6 437 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 PNRC2Q9NPJ4 139 aaKnown RBP14.09□□□□□ -0.15
PNKP-210ENST00000597965 DCAF13Q9NV06 445 aaKnown RBP14.09□□□□□ -0.15
PNKP-210ENST00000597965 CTSZQ9UBR2 303 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 KPTNQ9Y664 436 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 WNK1Q9H4A3 2382 aa14.09□□□□□ -0.15
PNKP-210ENST00000597965 A0A1B0GVI7 797 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 A6NLC8 198 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 BHLHE40O14503 412 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 GPR37O15354 613 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 GPR137BO60478 399 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 CLPXO76031 633 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 NCK1P16333 377 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 DDOSTP39656 456 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 SRSF4Q08170 494 aaKnown RBP14.08□□□□□ -0.16
PNKP-210ENST00000597965 SEC23BQ15437 767 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 CDONQ4KMG0 1287 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 GLYATQ6IB77 296 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 RPL13AP3Q6NVV1 102 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 C8orf82Q6P1X6 216 aaPredicted RBP14.08□□□□□ -0.16
PNKP-210ENST00000597965 BTN2A1Q7KYR7 527 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 CMTM4Q8IZR5 234 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 LHX4Q969G2 390 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 C7orf34Q96L11 122 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 RBM4BQ9BQ04 359 aaKnown RBP14.08□□□□□ -0.16
PNKP-210ENST00000597965 THTPAQ9BU02 230 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 CNTD2Q9H8S5 307 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 TCF7L1Q9HCS4 588 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 ABCD2Q9UBJ2 740 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 KAAG1Q9UBP8 84 aa14.08□□□□□ -0.16
PNKP-210ENST00000597965 hCG_1807616A0A1W2PRN6 198 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 XRCC2O43543 280 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 OR10H3O60404 316 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 MUC1P15941 1255 aaPredicted RBP14.07□□□□□ -0.16
PNKP-210ENST00000597965 IER3P46695 156 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 PRSS12P56730 875 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 GUCA2AQ02747 115 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 MICBQ29980 383 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 C16orf89Q6UX73 402 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 NAA40Q86UY6 237 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 DEFB107AQ8IZN7 70 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 OR52L1Q8NGH7 329 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 OR2T4Q8NH00 348 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 LINC01006Q8NI28 216 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 SIRPDQ9H106 197 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 C1orf123Q9NWV4 160 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 GMPR2Q9P2T1 348 aaKnown RBP14.07□□□□□ -0.16
PNKP-210ENST00000597965 NOTCH1P46531 2555 aa14.07□□□□□ -0.16
PNKP-210ENST00000597965 OR6C68A6NDL8 312 aa14.06□□□□□ -0.16
PNKP-210ENST00000597965 ANKRD30BLA7E2S9 258 aa14.06□□□□□ -0.16
PNKP-210ENST00000597965 DVL1O14640 695 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms