RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 OR8B12Q8NGG6 310 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 SPSB4Q96A44 273 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 SGK3Q96BR1 496 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 LGALS12Q96DT0 336 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 REG4Q9BYZ8 158 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 RGCCQ9H4X1 137 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 TMEM100Q9NV29 134 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 ZNF319Q9P2F9 582 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 MRM2Q9UI43 246 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 EXOGQ9Y2C4 368 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 RPL36Q9Y3U8 105 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 ACANP16112 2415 aa16.72■□□□□ 0.27
SHKBP1-214ENST00000597396 DAPL1A0PJW8 107 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 ACOD1A6NK06 481 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 LOC110117498-PIK3R3F6TDL0 507 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 SMAD7O15105 426 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 CDC14BO60729 498 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 LILRA1O75019 489 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 ATP6V1G2O95670 118 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 RIPK1Q13546 671 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 KRTAP21-3Q3LHN1 58 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 PLEKHG7Q6ZR37 379 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 FAM220AQ7Z4H9 259 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 OR56B2PQ8NGI1 322 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 CNIH3Q8TBE1 160 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 SLC30A2Q9BRI3 323 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 FAM206AQ9NX38 181 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 HSPE1-MOB4S4R3N1 261 aa16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 YLPM1P49750 1951 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-214ENST00000597396 IGHV1-69-2A0A0G2JMI3 117 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 METTL15A6NJ78 407 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 WBP4O75554 376 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 RPP14O95059 124 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 CD55P08174 381 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 ACHEP22303 614 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 COL8A2P25067 703 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 DDOSTP39656 456 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 AQP4P55087 323 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 MRPS11P82912 194 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 FAM3AP98173 230 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 ZNF85Q03923 595 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 KLHL22Q53GT1 634 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 COMMD2Q86X83 199 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 ACBD7Q8N6N7 88 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 ZNF540Q8NDQ6 660 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 OR10AD1Q8NGE0 317 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 YIPF5Q969M3 257 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 MRPL48Q96GC5 212 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 C18orf12Q96KH6 178 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 PBOV1Q9GZY1 135 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 MOB1AQ9H8S9 216 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 CHODLQ9H9P2 273 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 DLL4Q9NR61 685 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 NOP16Q9Y3C1 178 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 R4GMQ9 66 aa16.7■□□□□ 0.26
SHKBP1-214ENST00000597396 hCG_38984A0A1B0GV85 526 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 H0YJX3 145 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 SULT1C4O75897 302 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 FADS2O95864 444 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 GNAO1P09471 354 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 TNFRSF1AP19438 455 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 CRYBB2P43320 205 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 MMP16P51512 607 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 ISL1P61371 349 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 MFGE8Q08431 387 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 RAB40BQ12829 278 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 SMN1Q16637 294 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 BCL2L15Q5TBC7 163 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 CIARTQ8N365 385 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 ITLN1Q8WWA0 313 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 COX4I2Q96KJ9 171 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 SIGLEC11Q96RL6 698 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 MYCBPQ99417 103 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 SLC22A4Q9H015 551 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 IL19Q9UHD0 177 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 NUFIP1Q9UHK0 495 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 ZNF391Q9UJN7 358 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 GNG8Q9UK08 70 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 RRP15Q9Y3B9 282 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 VPS13CQ709C8 3753 aa16.69■□□□□ 0.26
SHKBP1-214ENST00000597396 A0A0U1RQV5 110 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 ANKRD30BLA7E2S9 258 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 H0YL77 283 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 J3QRE1 110 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 MLNRO43193 412 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 PNPP00491 289 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 HLA-DPB1P04440 258 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 INHBBP09529 407 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 FOSL1P15407 271 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 CA6P23280 308 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 GIFP27352 417 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 NR4A2P43354 598 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 GSK3AP49840 483 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 OR8G1Q15617 311 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 HFEQ30201 348 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 TP53I3Q53FA7 332 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 LIPNQ5VXI9 398 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 OR52I1Q8NGK6 324 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 TFAP2CQ92754 450 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 OR2V2Q96R30 315 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms