RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 WDFY1Q8IWB7 410 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 KCNRGQ8N5I3 272 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 RBM14Q96PK6 669 aaKnown RBP13.61□□□□□ -0.23
UPF1-204ENST00000596842 SPOCK3Q9BQ16 436 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 ADAM19Q9H013 955 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 MPTX1A8MV57 137 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 FBXO24O75426 580 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 MECP2P51608 486 aaKnown RBP13.61□□□□□ -0.23
UPF1-204ENST00000596842 MPPED2Q15777 294 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 FAM180AQ6UWF9 173 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 CLEC9AQ6UXN8 241 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 BEND4Q6ZU67 534 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 OR4K17Q8NGC6 315 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 CD300LFQ8TDQ1 290 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 SMIM3Q9BZL3 60 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 HS3ST3A1Q9Y663 406 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 OR6C76A6NM76 312 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 PLPP3O14495 311 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 CRTAPO75718 401 aaPredicted RBP13.61□□□□□ -0.23
UPF1-204ENST00000596842 KLK3P07288 261 aaPredicted RBP13.61□□□□□ -0.23
UPF1-204ENST00000596842 GLI4P10075 376 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 PLEKHN1Q494U1 663 aaPredicted RBP13.61□□□□□ -0.23
UPF1-204ENST00000596842 NKAPLQ5M9Q1 402 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 KCNK7Q9Y2U2 307 aa13.61□□□□□ -0.23
UPF1-204ENST00000596842 OR2F2O95006 317 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 POU2F2P09086 479 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 ZNF735P0CB33 412 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 SFTPDP35247 375 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 SLC26A5P58743 744 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 OR2F1Q13607 317 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 KIAA0895LQ68EN5 471 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 LCN10Q6JVE6 187 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 DAZLQ92904 295 aaKnown RBP13.6□□□□□ -0.23
UPF1-204ENST00000596842 MEGF11A6BM72 1044 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 FRG2CA6NGY1 282 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 RAB27BO00194 218 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 ST8SIA5O15466 376 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 NDUFA2O43678 99 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 DDAH2O95865 285 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 GP1BAP07359 652 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 FBLP22087 321 aaKnown RBP13.6□□□□□ -0.23
UPF1-204ENST00000596842 ZNF93P35789 620 aaPredicted RBP13.6□□□□□ -0.23
UPF1-204ENST00000596842 FBXO46Q6PJ61 603 aaPredicted RBP13.6□□□□□ -0.23
UPF1-204ENST00000596842 GLIPR1L1Q6UWM5 242 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 PUSL1Q8N0Z8 303 aaKnown RBP13.6□□□□□ -0.23
UPF1-204ENST00000596842 TMEM104Q8NE00 496 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 ZNF721Q8TF20 911 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 WWTR1Q9GZV5 400 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 FBRSQ9HAH7 460 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 LANCL2Q9NS86 450 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 KLRF1Q9NZS2 232 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 DRD1P21728 446 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 OR3A2P47893 321 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 PRSS12P56730 875 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 SSTP61278 116 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 BATFQ16520 125 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 TMEM244Q5VVB8 128 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 SLAMF6Q96DU3 332 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 RALGAPA1Q6GYQ0 2036 aa13.6□□□□□ -0.23
UPF1-204ENST00000596842 ABCD4O14678 606 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 SOCS1O15524 211 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 ZNF205O95201 554 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 VSIG8P0DPA2 414 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 EFNA3P52797 238 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 IGLV3-21P80748 117 aaPredicted RBP13.59□□□□□ -0.23
UPF1-204ENST00000596842 UNC119Q13432 240 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 TOMM20Q15388 145 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 TEX30Q5JUR7 227 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 ADIPOR1Q96A54 375 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 A0A1W2PNR3 127 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 SCGB1D2O95969 90 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 MBP02144 154 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 ACAA1P09110 424 aaPredicted RBP13.59□□□□□ -0.23
UPF1-204ENST00000596842 BCKDHBP21953 392 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 SLC6A9P48067 706 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 MEF2DQ14814 521 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 INPP5JQ15735 1006 aaPredicted RBP13.59□□□□□ -0.23
UPF1-204ENST00000596842 ARHGEF39Q8N4T4 335 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 C11orf40Q8WZ69 217 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 THRSPQ92748 146 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 ZNF701Q9NV72 531 aaPredicted RBP13.59□□□□□ -0.23
UPF1-204ENST00000596842 PURGQ9UJV8 347 aaKnown RBP13.59□□□□□ -0.23
UPF1-204ENST00000596842 FRYLO94915 3013 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 SOX15O60248 233 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 SERPINA5P05154 406 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 PSMB6P28072 239 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 ZNF519Q8TB69 540 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 ISOC2Q96AB3 205 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 SLC5A6Q9Y289 635 aa13.59□□□□□ -0.23
UPF1-204ENST00000596842 ZNF354AO60765 605 aaPredicted RBP13.58□□□□□ -0.23
UPF1-204ENST00000596842 FOXK1P85037 733 aa13.58□□□□□ -0.23
UPF1-204ENST00000596842 OR2B11Q5JQS5 317 aa13.58□□□□□ -0.23
UPF1-204ENST00000596842 GRINAQ7Z429 371 aa13.58□□□□□ -0.23
UPF1-204ENST00000596842 RAB22AQ9UL26 194 aa13.58□□□□□ -0.23
UPF1-204ENST00000596842 WIPF3A6NGB9 483 aa13.58□□□□□ -0.24
UPF1-204ENST00000596842 SULT2B1O00204 365 aa13.58□□□□□ -0.24
UPF1-204ENST00000596842 NME2P22392 152 aa13.58□□□□□ -0.24
UPF1-204ENST00000596842 CPT2P23786 658 aa13.58□□□□□ -0.24
UPF1-204ENST00000596842 ZBTB25P24278 435 aa13.58□□□□□ -0.24
UPF1-204ENST00000596842 FAM69BQ5VUD6 431 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms