RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 OR2V2Q96R30 315 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 OR8B4Q96RC9 309 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 NIPAL2Q9H841 368 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 CHODLQ9H9P2 273 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 HAO2Q9NYQ3 351 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 ZNF319Q9P2F9 582 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.41□□□□□ -0.9
LIG1-211ENST00000596457 DYSFO75923 2080 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 ACANP16112 2415 aa9.41□□□□□ -0.9
LIG1-211ENST00000596457 STAB1Q9NY15 2570 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 IGHV4-61A0A0C4DH41 118 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 A0A1W2PQL4 384 aaPredicted RBP9.4□□□□□ -0.9
LIG1-211ENST00000596457 SNTNA6NMZ2 147 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 CD300LBA8K4G0 201 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 E9PQ18 207 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 F5H5P2 479 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 MLNRO43193 412 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 OR2T7P0C7T2 308 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 TNFRSF1AP19438 455 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 GIFP27352 417 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 MTNR1AP48039 350 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 LOXL1Q08397 574 aaPredicted RBP9.4□□□□□ -0.9
LIG1-211ENST00000596457 OCLNQ16625 522 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 OGFRL1Q5TC84 451 aaPredicted RBP9.4□□□□□ -0.9
LIG1-211ENST00000596457 RHOUQ7L0Q8 258 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 SSX6Q7RTT6 188 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 DHRSXQ8N5I4 330 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 OR8B12Q8NGG6 310 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 OR56B2PQ8NGI1 322 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 OR52H1Q8NGJ2 320 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 OR2T27Q8NH04 317 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 PPP1R14AQ96A00 147 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 Q96MT0 163 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 MNTQ99583 582 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 SLC30A2Q9BRI3 323 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 AMBNQ9NP70 447 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 IL19Q9UHD0 177 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 TANC2Q9HCD6 1990 aa9.4□□□□□ -0.9
LIG1-211ENST00000596457 MAP1AP78559 2803 aaPredicted RBP9.4□□□□□ -0.91
LIG1-211ENST00000596457 CSPG4Q6UVK1 2322 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 DAPL1A0PJW8 107 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 ISPDA4D126 451 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 ANKRD30BLA7E2S9 258 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 CLDN25C9JDP6 229 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 DLGAP1O14490 977 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 SLC16A6O15403 523 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 MPZL2O60487 215 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 ZNF254O75437 659 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 KRT8P05787 483 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 CD55P08174 381 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 ADH4P08319 380 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 SRP9P49458 86 aaKnown RBP9.39□□□□□ -0.91
LIG1-211ENST00000596457 GSK3AP49840 483 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 TMEM33P57088 247 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 PSMA6P60900 246 aaKnown RBP9.39□□□□□ -0.91
LIG1-211ENST00000596457 FAM3AP98173 230 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 SLC34A1Q06495 639 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 MFGE8Q08431 387 aaPredicted RBP9.39□□□□□ -0.91
LIG1-211ENST00000596457 TMED1Q13445 227 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 RIN1Q13671 783 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 ODF4Q2M2E3 257 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 ZNF829Q3KNS6 432 aaPredicted RBP9.39□□□□□ -0.91
LIG1-211ENST00000596457 TTC23Q5W5X9 447 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 DEGS2Q6QHC5 323 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 PRSS45Q7RTY3 260 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 PACRGLQ8N7B6 248 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 RHOXF1Q8NHV9 184 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 SPATA3Q8NHX4 192 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 ZNF420Q8TAQ5 688 aaPredicted RBP9.39□□□□□ -0.91
LIG1-211ENST00000596457 MEGF10Q96KG7 1140 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 RDH12Q96NR8 316 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 SOX7Q9BT81 388 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 ADAT1Q9BUB4 502 aaKnown RBP9.39□□□□□ -0.91
LIG1-211ENST00000596457 PBOV1Q9GZY1 135 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 VCXQ9H320 206 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 OPA3Q9H6K4 179 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 C8orf4Q9NR00 106 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 YAE1D1Q9NRH1 226 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 MRM2Q9UI43 246 aaKnown RBP9.39□□□□□ -0.91
LIG1-211ENST00000596457 GNG8Q9UK08 70 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 PPP1R3CQ9UQK1 317 aa9.39□□□□□ -0.91
LIG1-211ENST00000596457 YLPM1P49750 1951 aaKnown RBP9.39□□□□□ -0.91
LIG1-211ENST00000596457 FLNAP21333 2647 aaKnown RBP9.38□□□□□ -0.91
LIG1-211ENST00000596457 ZNF469Q96JG9 3925 aaPredicted RBP9.38□□□□□ -0.91
LIG1-211ENST00000596457 A0A096LNT2 108 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 METTL15A6NJ78 407 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 LOC110117498-PIK3R3F6TDL0 507 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 H3BSH0 61 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 WNT9BO14905 357 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 CASQ2O14958 399 aaPredicted RBP9.38□□□□□ -0.91
LIG1-211ENST00000596457 RP2O75695 350 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 GRPP07492 148 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 GABRB1P18505 474 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 CFL1P23528 166 aaKnown RBP9.38□□□□□ -0.91
LIG1-211ENST00000596457 PSMB10P40306 273 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 CHN2P52757 468 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 MRPS11P82912 194 aaKnown RBP9.38□□□□□ -0.91
LIG1-211ENST00000596457 ROM1Q03395 351 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 ZNF85Q03923 595 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 ZNF91Q05481 1191 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms