RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 DUX4Q9UBX2 424 aa13.31□□□□□ -0.28
LIM2-202ENST00000596399 OOEPA6NGQ2 149 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 GMDSO60547 372 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 GMNNO75496 209 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 PTBP3O95758 552 aaKnown RBP13.3□□□□□ -0.28
LIM2-202ENST00000596399 IGHV4-59P01825 116 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 FABP3P05413 133 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 GYPBP06028 91 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 TSPAN31Q12999 210 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 C17orf107Q6ZR85 190 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 BTN2A1Q7KYR7 527 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 DCXRQ7Z4W1 244 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 FAM90A1Q86YD7 464 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 GCSAMQ8N6F7 178 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 ZNF511Q8NB15 262 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 OR9Q2Q8NGE9 314 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 OR56B2PQ8NGI1 322 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 OR8D4Q8NGM9 314 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 GNPDA2Q8TDQ7 276 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 SPTSSAQ969W0 71 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 WDFY2Q96P53 400 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 SIRPDQ9H106 197 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 BEX1Q9HBH7 125 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 NOX4Q9NPH5 578 aa13.3□□□□□ -0.28
LIM2-202ENST00000596399 A0A0U1RQK1 487 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 P2RY10O00398 339 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 BHLHE40O14503 412 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 DVL1O14640 695 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 ARPC2O15144 300 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 IDH3BO43837 385 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 CRYBA1P05813 215 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 OTX1P32242 354 aaPredicted RBP13.29□□□□□ -0.28
LIM2-202ENST00000596399 NPY4RP50391 375 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 PPP1R8Q12972 351 aaKnown RBP13.29□□□□□ -0.28
LIM2-202ENST00000596399 CD276Q5ZPR3 534 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 OLFML2AQ68BL7 652 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 RHOUQ7L0Q8 258 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 WDR86Q86TI4 376 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 SLC37A3Q8NCC5 494 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 OR4F5Q8NH21 305 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 GATAD2BQ8WXI9 593 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 SEH1LQ96EE3 360 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 BTBD10Q9BSF8 475 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 COPS4Q9BT78 406 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 FAM107BQ9H098 131 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 CENPMQ9NSP4 180 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 ACOXLQ9NUZ1 547 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 COMMD3-BMI1R4GMX3 469 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 NOTCH1P46531 2555 aa13.29□□□□□ -0.28
LIM2-202ENST00000596399 PRKDCP78527 4128 aaKnown RBP13.28□□□□□ -0.28
LIM2-202ENST00000596399 TRAV38-1A0A0B4J264 116 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 IGHV1-69DA0A0B4J2H0 117 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 hCG_1807616A0A1W2PRN6 198 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 A6NLC8 198 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 LHBP01229 141 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 IGHV1-69P01742 117 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 SPARCP09486 303 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 CLUP10909 449 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 DLX1P56177 255 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 METTL11BQ5VVY1 283 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 BRICD5Q6PL45 260 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 DRAM2Q6UX65 266 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 C11orf53Q8IXP5 236 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 MCUR1Q96AQ8 359 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 SLAMF6Q96DU3 332 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 FAM71F1Q96KD3 344 aaPredicted RBP13.28□□□□□ -0.28
LIM2-202ENST00000596399 CDRT15Q96T59 188 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 CITED1Q99966 193 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 SLC22A4Q9H015 551 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 SEMA6AQ9H2E6 1030 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 IL1RAPQ9NPH3 570 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 MRPL15Q9P015 296 aaKnown RBP13.28□□□□□ -0.28
LIM2-202ENST00000596399 CD300AQ9UGN4 299 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 MAGEL2Q9UJ55 1249 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 KCNG2Q9UJ96 466 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 CDH10Q9Y6N8 788 aa13.28□□□□□ -0.28
LIM2-202ENST00000596399 CLPSL1A2RUU4 121 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 ZNF593O00488 134 aaPredicted RBP13.27□□□□□ -0.29
LIM2-202ENST00000596399 NDUFA7O95182 113 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 GASTP01350 101 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 HSD17B1P14061 328 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 IFNGR2P38484 337 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 BPIFB3P59826 476 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 KCNJ8Q15842 424 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 ZDHHC21Q8IVQ6 265 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 PNLDC1Q8NA58 520 aaKnown RBP13.27□□□□□ -0.29
LIM2-202ENST00000596399 PLPP7Q8NBV4 271 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 OR2T4Q8NH00 348 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 ST8SIA4Q92187 359 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 NSMCE2Q96MF7 247 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 CCT8L2Q96SF2 557 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 CCL13Q99616 98 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 DNAJB11Q9UBS4 358 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 LYVE1Q9Y5Y7 322 aa13.27□□□□□ -0.29
LIM2-202ENST00000596399 A0A1B0GUS0 222 aa13.26□□□□□ -0.29
LIM2-202ENST00000596399 TBX1O43435 398 aa13.26□□□□□ -0.29
LIM2-202ENST00000596399 GPR137BO60478 399 aa13.26□□□□□ -0.29
LIM2-202ENST00000596399 TFF1P04155 84 aa13.26□□□□□ -0.29
LIM2-202ENST00000596399 LIPFP07098 398 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms