RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ATP6V1E1P36543 226 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 CRYBB2P43320 205 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 MTNR1AP48039 350 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 RIDAP52758 137 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 ADARB1P78563 741 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 FAM3AP98173 230 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF85Q03923 595 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF91Q05481 1191 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 SLC34A1Q06495 639 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 POU4F2Q12837 409 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 TMED1Q13445 227 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF691Q5VV52 312 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 MEDAGQ5VYS4 303 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 OR13G1Q8NGZ3 307 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 ASB17Q8WXJ9 295 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 SPSB4Q96A44 273 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 LYZL4Q96KX0 146 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 OR2V2Q96R30 315 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 MNTQ99583 582 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 MROQ9BYG7 248 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 OR10A2Q9H208 303 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 NARFLQ9H6Q4 476 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 PPP1R3EQ9H7J1 279 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 CHODLQ9H9P2 273 aa11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.68□□□□□ -0.54
SHKBP1-207ENST00000595631 hCG_38984A0A1B0GV85 526 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 TMEM269A0A1B0GVZ9 245 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 PHYHO14832 338 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 WNT9BO14905 357 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 PPIHO43447 177 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 WBP4O75554 376 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 RPP14O95059 124 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 OR2T7P0C7T2 308 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 DBTP11182 482 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 USF1P22415 310 aaPredicted RBP11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 IL5RAQ01344 420 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 SMN1Q16637 294 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 AVPI1Q5T686 147 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 DEGS2Q6QHC5 323 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 CLEC9AQ6UXN8 241 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 BIVMQ86UB2 503 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 OR52H1Q8NGJ2 320 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 OR2T27Q8NH04 317 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 CNIH3Q8TBE1 160 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 LGALS12Q96DT0 336 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 DIRC2Q96SL1 478 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 EGLN1Q9GZT9 426 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 NIPAL2Q9H841 368 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 RNPEPL1Q9HAU8 725 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 C8orf4Q9NR00 106 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 TMEM100Q9NV29 134 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 GTF2A1LQ9UNN4 478 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 MALRD1Q5VYJ5 2156 aa11.67□□□□□ -0.54
SHKBP1-207ENST00000595631 ABCA1O95477 2261 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 A0A1B0GWJ7 208 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 H0YHG0 523 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 J3QRE1 110 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 MPZL2O60487 215 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF254O75437 659 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 GNAO1P09471 354 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 TNFSF4P23510 183 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 IL2RGP31785 369 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 GPR6P46095 362 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 GSK3AP49840 483 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 MRPS11P82912 194 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 MVKQ03426 396 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 EGR3Q06889 387 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 LOXL1Q08397 574 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 TP53I3Q53FA7 332 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF684Q5T5D7 378 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 DHRSXQ8N5I4 330 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 YIPF7Q8N8F6 280 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF420Q8TAQ5 688 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 CCL17Q92583 94 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 MEGF10Q96KG7 1140 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 SIGLEC11Q96RL6 698 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 ADAT1Q9BUB4 502 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 ADI1Q9BV57 179 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 PBOV1Q9GZY1 135 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 SP140LQ9H930 580 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 G6PC2Q9NQR9 355 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 IL19Q9UHD0 177 aa11.66□□□□□ -0.54
SHKBP1-207ENST00000595631 LOC110117498-PIK3R3F6TDL0 507 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 TTRP02766 147 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 KRT8P05787 483 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 ACKR3P25106 362 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 CAPGP40121 348 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 MAB21L1Q13394 359 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 OR8G1Q15617 311 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 OR8B8Q15620 311 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 TMEM249Q2WGJ8 235 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 HFEQ30201 348 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF829Q3KNS6 432 aaPredicted RBP11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 PRAMEF6Q5VXH4 476 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 ZNF771Q7L3S4 317 aaPredicted RBP11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 Q96MT0 163 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 OPA3Q9H6K4 179 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 ACOXLQ9NUZ1 547 aa11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 EXOGQ9Y2C4 368 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-207ENST00000595631 MYRFQ9Y2G1 1151 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms