RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 GGT3PA6NGU5 568 aa13□□□□□ -0.33
USE1-206ENST00000595101 HEXAP06865 529 aa13□□□□□ -0.33
USE1-206ENST00000595101 GPR6P46095 362 aaPredicted RBP13□□□□□ -0.33
USE1-206ENST00000595101 MRPS11P82912 194 aaKnown RBP13□□□□□ -0.33
USE1-206ENST00000595101 ROM1Q03395 351 aa13□□□□□ -0.33
USE1-206ENST00000595101 MVKQ03426 396 aa13□□□□□ -0.33
USE1-206ENST00000595101 MFGE8Q08431 387 aaPredicted RBP13□□□□□ -0.33
USE1-206ENST00000595101 MAB21L1Q13394 359 aa13□□□□□ -0.33
USE1-206ENST00000595101 ZMAT1Q5H9K5 638 aa13□□□□□ -0.33
USE1-206ENST00000595101 ANKRD13BQ86YJ7 626 aa13□□□□□ -0.33
USE1-206ENST00000595101 ZNF679Q8IYX0 411 aa13□□□□□ -0.33
USE1-206ENST00000595101 OR8B12Q8NGG6 310 aa13□□□□□ -0.33
USE1-206ENST00000595101 OR13G1Q8NGZ3 307 aa13□□□□□ -0.33
USE1-206ENST00000595101 SPRYD4Q8WW59 207 aaPredicted RBP13□□□□□ -0.33
USE1-206ENST00000595101 TRUB1Q8WWH5 349 aaKnown RBP13□□□□□ -0.33
USE1-206ENST00000595101 PGAM5Q96HS1 289 aa13□□□□□ -0.33
USE1-206ENST00000595101 AMBNQ9NP70 447 aa13□□□□□ -0.33
USE1-206ENST00000595101 TMEM100Q9NV29 134 aa13□□□□□ -0.33
USE1-206ENST00000595101 FAM206AQ9NX38 181 aa13□□□□□ -0.33
USE1-206ENST00000595101 SMPD3Q9NY59 655 aaPredicted RBP13□□□□□ -0.33
USE1-206ENST00000595101 MRM2Q9UI43 246 aaKnown RBP13□□□□□ -0.33
USE1-206ENST00000595101 IKZF2Q9UKS7 526 aa13□□□□□ -0.33
USE1-206ENST00000595101 FN1P02751 2386 aaKnown RBP13□□□□□ -0.33
USE1-206ENST00000595101 CUBNO60494 3623 aa13□□□□□ -0.33
USE1-206ENST00000595101 A0A1B0GWJ7 208 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 TACSTD2P09758 323 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 IGHV4-31P0DP07 118 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 TMEM33P57088 247 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 TIGD6Q17RP2 521 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 ZNF540Q8NDQ6 660 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 RHOXF1Q8NHV9 184 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 ZNF420Q8TAQ5 688 aaPredicted RBP12.99□□□□□ -0.33
USE1-206ENST00000595101 MEGF10Q96KG7 1140 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 DIRC2Q96SL1 478 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 MROQ9BYG7 248 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 EGLN1Q9GZT9 426 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 IL19Q9UHD0 177 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 SONP18583 2426 aaKnown RBP12.99□□□□□ -0.33
USE1-206ENST00000595101 hCG_38984A0A1B0GV85 526 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 TMEM269A0A1B0GVZ9 245 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 SLC16A6O15403 523 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 XRCC2O43543 280 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 PEX14O75381 377 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 SRSF10O75494 262 aaKnown RBP12.99□□□□□ -0.33
USE1-206ENST00000595101 ACKR3P25106 362 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 PMELP40967 661 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 PSMA6P60900 246 aaKnown RBP12.99□□□□□ -0.33
USE1-206ENST00000595101 OCLNQ16625 522 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 HFEQ30201 348 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 SLC25A30Q5SVS4 291 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 KCTD18Q6PI47 426 aaPredicted RBP12.99□□□□□ -0.33
USE1-206ENST00000595101 OR10H4Q8NGA5 316 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 APH1BQ8WW43 257 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 ASB17Q8WXJ9 295 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 RNFT2Q96EX2 444 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 OR10A2Q9H208 303 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 GCM1Q9NP62 436 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 WIPI2Q9Y4P8 454 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 TMEM14AQ9Y6G1 99 aa12.99□□□□□ -0.33
USE1-206ENST00000595101 NSD1Q96L73 2696 aaPredicted RBP12.99□□□□□ -0.33
USE1-206ENST00000595101 INAFM1C9JVW0 142 aa12.98□□□□□ -0.33
USE1-206ENST00000595101 ZNF670-ZNF695F2Z2N8 137 aa12.98□□□□□ -0.33
USE1-206ENST00000595101 ZNF205O95201 554 aa12.98□□□□□ -0.33
USE1-206ENST00000595101 ATP6V1E1P36543 226 aa12.98□□□□□ -0.33
USE1-206ENST00000595101 MTNR1AP48039 350 aa12.98□□□□□ -0.33
USE1-206ENST00000595101 GSK3AP49840 483 aa12.98□□□□□ -0.33
USE1-206ENST00000595101 ZNF85Q03923 595 aa12.98□□□□□ -0.33
USE1-206ENST00000595101 SMN1Q16637 294 aaKnown RBP12.98□□□□□ -0.33
USE1-206ENST00000595101 OGFRL1Q5TC84 451 aaPredicted RBP12.98□□□□□ -0.33
USE1-206ENST00000595101 OR52H1Q8NGJ2 320 aa12.98□□□□□ -0.33
USE1-206ENST00000595101 CLDND2Q8NHS1 167 aa12.98□□□□□ -0.33
USE1-206ENST00000595101 MSI2Q96DH6 328 aaKnown RBP12.98□□□□□ -0.33
USE1-206ENST00000595101 LOC100289279A0A1B0GTE1 492 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 CASQ2O14958 399 aaPredicted RBP12.97□□□□□ -0.33
USE1-206ENST00000595101 RPP14O95059 124 aaKnown RBP12.97□□□□□ -0.33
USE1-206ENST00000595101 APOC1P02654 83 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 TNFSF4P23510 183 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 RIDAP52758 137 aaKnown RBP12.97□□□□□ -0.33
USE1-206ENST00000595101 MPPED2Q15777 294 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 DMRTC1Q5HYR2 192 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 ZNF684Q5T5D7 378 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 PRAMEF6Q5VXH4 476 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 DEGS2Q6QHC5 323 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 CYGBQ8WWM9 190 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 RFKQ969G6 155 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 PBOV1Q9GZY1 135 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 TMEM106BQ9NUM4 274 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 PPP1R3CQ9UQK1 317 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 RHBDD3Q9Y3P4 386 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 J3QRE1 110 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 CD5LO43866 347 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 OR2T7P0C7T2 308 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 ZNF16P17020 682 aaPredicted RBP12.97□□□□□ -0.33
USE1-206ENST00000595101 POU4F2Q12837 409 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 FAM201AQ5SY85 155 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 MOGAT3Q86VF5 341 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 OR2T27Q8NH04 317 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 NRG4Q8WWG1 115 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 LGALS12Q96DT0 336 aa12.97□□□□□ -0.33
USE1-206ENST00000595101 SIGLEC11Q96RL6 698 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms