RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 FBXW5Q969U6 566 aa17■□□□□ 0.31
LSM4-203ENST00000593829 CISD1Q9NZ45 108 aaKnown RBP17■□□□□ 0.31
LSM4-203ENST00000593829 NLKQ9UBE8 527 aa17■□□□□ 0.31
LSM4-203ENST00000593829 MOKQ9UQ07 419 aa17■□□□□ 0.31
LSM4-203ENST00000593829 EXOGQ9Y2C4 368 aaKnown RBP17■□□□□ 0.31
LSM4-203ENST00000593829 PLEKHA6Q9Y2H5 1048 aa17■□□□□ 0.31
LSM4-203ENST00000593829 COA3Q9Y2R0 106 aaPredicted RBP17■□□□□ 0.31
LSM4-203ENST00000593829 CSMD2Q7Z408 3487 aa17■□□□□ 0.31
LSM4-203ENST00000593829 OR6C68A6NDL8 312 aa17■□□□□ 0.31
LSM4-203ENST00000593829 ATP6V1G2-DDX39BF2Z307 99 aa17■□□□□ 0.31
LSM4-203ENST00000593829 SHOXO15266 292 aa17■□□□□ 0.31
LSM4-203ENST00000593829 ZNF14P17017 642 aaPredicted RBP17■□□□□ 0.31
LSM4-203ENST00000593829 MSR1P21757 451 aa17■□□□□ 0.31
LSM4-203ENST00000593829 DNASE1P24855 282 aa17■□□□□ 0.31
LSM4-203ENST00000593829 LAP3P28838 519 aa17■□□□□ 0.31
LSM4-203ENST00000593829 AP2S1P53680 142 aaPredicted RBP17■□□□□ 0.31
LSM4-203ENST00000593829 P2RY14Q15391 338 aa17■□□□□ 0.31
LSM4-203ENST00000593829 RFPL4BQ6ZWI9 263 aa17■□□□□ 0.31
LSM4-203ENST00000593829 MYPOPQ86VE0 399 aaPredicted RBP17■□□□□ 0.31
LSM4-203ENST00000593829 NPEPL1Q8NDH3 523 aa17■□□□□ 0.31
LSM4-203ENST00000593829 RFKQ969G6 155 aa17■□□□□ 0.31
LSM4-203ENST00000593829 TSSK2Q96PF2 358 aa17■□□□□ 0.31
LSM4-203ENST00000593829 PTTG3PQ9NZH4 202 aa17■□□□□ 0.31
LSM4-203ENST00000593829 SPG11Q96JI7 2443 aa16.99■□□□□ 0.31
LSM4-203ENST00000593829 INMT-MINDY4F8WBC2 141 aa16.99■□□□□ 0.31
LSM4-203ENST00000593829 CST2P09228 141 aa16.99■□□□□ 0.31
LSM4-203ENST00000593829 BDH1Q02338 343 aa16.99■□□□□ 0.31
LSM4-203ENST00000593829 IL18Q14116 193 aa16.99■□□□□ 0.31
LSM4-203ENST00000593829 OR5H6Q8NGV6 325 aa16.99■□□□□ 0.31
LSM4-203ENST00000593829 MS4A3Q96HJ5 214 aa16.99■□□□□ 0.31
LSM4-203ENST00000593829 DHRS9Q9BPW9 319 aa16.99■□□□□ 0.31
LSM4-203ENST00000593829 SRA1Q9HD15 236 aaKnown RBP16.99■□□□□ 0.31
LSM4-203ENST00000593829 B9D1Q9UPM9 204 aa16.99■□□□□ 0.31
LSM4-203ENST00000593829 CADP27708 2225 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 DCTN6O00399 190 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 ICMTO60725 284 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 IGHA1P01876 353 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 SERPINA5P05154 406 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 MMP7P09237 267 aaPredicted RBP16.98■□□□□ 0.31
LSM4-203ENST00000593829 PCBD1P61457 104 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 MRPL28Q13084 256 aaKnown RBP16.98■□□□□ 0.31
LSM4-203ENST00000593829 PGGHGQ32M88 737 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 HACD4Q5VWC8 232 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 ELMOD2Q8IZ81 293 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 OR6V1Q8N148 313 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 FBXO17Q96EF6 278 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 FOXN4Q96NZ1 517 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 MCUBQ9NWR8 336 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 FKBP7Q9Y680 259 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 ATP23Q9Y6H3 246 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 TEX15Q9BXT5 2789 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 ANKRD17O75179 2603 aaKnown RBP16.98■□□□□ 0.31
LSM4-203ENST00000593829 GABRPO00591 440 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 NOS1APO75052 506 aaPredicted RBP16.98■□□□□ 0.31
LSM4-203ENST00000593829 IFNGP01579 166 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 SLC6A1P30531 599 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 CENPAP49450 140 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 PLP2Q04941 152 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 AADACL4Q5VUY2 407 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 C9orf62Q8N4C0 152 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 CYB561A3Q8NBI2 242 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 OTULINQ96BN8 352 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 ZNF649Q9BS31 505 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 ZNF416Q9BWM5 594 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 EMC7Q9NPA0 242 aa16.98■□□□□ 0.31
LSM4-203ENST00000593829 IGLV1-36A0A0B4J1U3 117 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 IGHV2OR16-5A0A0B4J2B6 119 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 RIIAD1A6NNX1 92 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 C12orf71A8MTZ7 269 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 E7EQL1 145 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 ZNF32P17041 273 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 CD53P19397 219 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 CALCRP30988 508 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 MTNR1BP49286 362 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 INPP1P49441 399 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 CAV3P56539 151 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 ENDOGQ14249 297 aaKnown RBP16.97■□□□□ 0.31
LSM4-203ENST00000593829 ZNF584Q8IVC4 421 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 KLHL36Q8N4N3 616 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 SLC37A3Q8NCC5 494 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 OR4F15Q8NGB8 312 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 SMAP2Q8WU79 429 aaPredicted RBP16.97■□□□□ 0.31
LSM4-203ENST00000593829 KCTD12Q96CX2 325 aaKnown RBP16.97■□□□□ 0.31
LSM4-203ENST00000593829 DCLRE1CQ96SD1 692 aaKnown RBP16.97■□□□□ 0.31
LSM4-203ENST00000593829 DDOQ99489 341 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 CCL19Q99731 98 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 WACQ9BTA9 647 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 FN3KQ9H479 309 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 TIMM10BQ9Y5J6 103 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 AUP1Q9Y679 476 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 AKAP6Q13023 2319 aa16.97■□□□□ 0.31
LSM4-203ENST00000593829 RAI1Q7Z5J4 1906 aaPredicted RBP16.96■□□□□ 0.31
LSM4-203ENST00000593829 C7orf66A4D0T2 115 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 LINC00862A6NCI5 91 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 AKR7A2O43488 359 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 HSF2Q03933 536 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 GLO1Q04760 184 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 PLA1AQ53H76 456 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 B3GLCTQ6Y288 498 aa16.96■□□□□ 0.31
LSM4-203ENST00000593829 SYT9Q86SS6 491 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms