RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 A8MXE2 369 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 C19orf84I3L1E1 186 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 SYT7O43581 403 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 SERPINA5P05154 406 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 CLEC2LP0C7M8 214 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 ZNF12P17014 697 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 PAX7P23759 505 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 MAGEB1P43366 347 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 ADORA2A-AS1P86434 159 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 C1QTNF12Q5T7M4 302 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 ZNF474Q6S9Z5 364 aaPredicted RBP11.69□□□□□ -0.54
VMP1-217ENST00000593168 Q6ZSR3 168 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 DOK3Q7L591 496 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 MDP1Q86V88 176 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 CROCCP3Q8IVE0 287 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 WDR31Q8NA23 367 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 PLPP7Q8NBV4 271 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 OR51A4Q8NGJ6 313 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 MCFD2Q8NI22 146 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 TMEM106AQ96A25 262 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 ZNF75AQ96N20 296 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 KCNS3Q9BQ31 491 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 OR10A2Q9H208 303 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 ZCCHC4Q9H5U6 513 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 ZNF275Q9NSD4 429 aaPredicted RBP11.69□□□□□ -0.54
VMP1-217ENST00000593168 MEMO1Q9Y316 297 aa11.69□□□□□ -0.54
VMP1-217ENST00000593168 LOC100509620A0A075B734 347 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 PDCD5O14737 125 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 LCATP04180 440 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 CBR1P16152 277 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 PSMB1P20618 241 aaKnown RBP11.68□□□□□ -0.54
VMP1-217ENST00000593168 STOMP27105 288 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 APEX1P27695 318 aaKnown RBP11.68□□□□□ -0.54
VMP1-217ENST00000593168 HOXC12P31275 282 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 CDSNQ15517 529 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 COLCA1Q6ZS62 124 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 BHLHA15Q7RTS1 189 aaPredicted RBP11.68□□□□□ -0.54
VMP1-217ENST00000593168 ZNF584Q8IVC4 421 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 OR51E1Q8TCB6 317 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 RND1Q92730 232 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 SGK3Q96BR1 496 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 POM121L2Q96KW2 1035 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 C1QTNF5Q9BXJ0 243 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 BARHL1Q9BZE3 327 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 SLITRK2Q9H156 845 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 RGCCQ9H4X1 137 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 TCF7L1Q9HCS4 588 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 GPR84Q9NQS5 396 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 ZNF391Q9UJN7 358 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 FOXJ3Q9UPW0 622 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 N6AMT1Q9Y5N5 214 aa11.68□□□□□ -0.54
VMP1-217ENST00000593168 TBX1O43435 398 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 TMEM127O75204 238 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 FSTP19883 344 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 RAB3BP20337 219 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 CFL1P23528 166 aaKnown RBP11.67□□□□□ -0.54
VMP1-217ENST00000593168 APLNRP35414 380 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 PSMD7P51665 324 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 HGFACQ04756 655 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 HNRNPA0Q13151 305 aaKnown RBP11.67□□□□□ -0.54
VMP1-217ENST00000593168 SNAI3Q3KNW1 292 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 KRTAP21-3Q3LHN1 58 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 CEP78Q5JTW2 689 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 MTFR2Q6P444 385 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 STAC2Q6ZMT1 411 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 PARP16Q8N5Y8 322 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 FAM169BQ8N8A8 192 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 OR13C3Q8NGS6 347 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 TBC1D15Q8TC07 691 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 AP3S1Q92572 193 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 ITFG2Q969R8 447 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 USB1Q9BQ65 265 aaKnown RBP11.67□□□□□ -0.54
VMP1-217ENST00000593168 MOV10Q9HCE1 1003 aaKnown RBP11.67□□□□□ -0.54
VMP1-217ENST00000593168 ELOVL5Q9NYP7 299 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 JKAMPQ9P055 326 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 AMDHD2Q9Y303 409 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 PCNX1Q96RV3 2341 aa11.67□□□□□ -0.54
VMP1-217ENST00000593168 A0A0G2JK05 382 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 LOC390937A0A1W2PQ73 354 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 C5orf63A6NC05 138 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 OR5H1A6NKK0 313 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 NOTOA8MTQ0 251 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 H3BSH0 61 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 IGKV3-15P01624 115 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 ZNF14P17017 642 aaPredicted RBP11.66□□□□□ -0.54
VMP1-217ENST00000593168 IGFBP3P17936 291 aaPredicted RBP11.66□□□□□ -0.54
VMP1-217ENST00000593168 BMP5P22003 454 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 ANOS1P23352 680 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 IL32P24001 234 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 SSTR2P30874 369 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 TSC22D1Q15714 1073 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 TIMM23BQ5SRD1 257 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 XKRXQ6PP77 449 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 SPNS3Q6ZMD2 512 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 LRRTM1Q86UE6 522 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 SERPINA12Q8IW75 414 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 OR6Q1Q8NGQ2 317 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 OR1J2Q8NGS2 313 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 OR14K1Q8NGZ2 314 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 APOBEC3DQ96AK3 386 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms