RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 NEIL1Q96FI4 390 aaPredicted RBP6.12□□□□□ -1.43
VAT1-209ENST00000592388 MAP6Q96JE9 813 aa6.12□□□□□ -1.43
VAT1-209ENST00000592388 ZNF582Q96NG8 517 aaPredicted RBP6.12□□□□□ -1.43
VAT1-209ENST00000592388 PITX2Q99697 317 aa6.12□□□□□ -1.43
VAT1-209ENST00000592388 ELAC2Q9BQ52 826 aaKnown RBP6.12□□□□□ -1.43
VAT1-209ENST00000592388 IFT27Q9BW83 186 aa6.12□□□□□ -1.43
VAT1-209ENST00000592388 MYLK2Q9H1R3 596 aa6.12□□□□□ -1.43
VAT1-209ENST00000592388 SPAG4Q9NPE6 437 aa6.12□□□□□ -1.43
VAT1-209ENST00000592388 NOX4Q9NPH5 578 aa6.12□□□□□ -1.43
VAT1-209ENST00000592388 DCAF13Q9NV06 445 aaKnown RBP6.12□□□□□ -1.43
VAT1-209ENST00000592388 CTSZQ9UBR2 303 aa6.12□□□□□ -1.43
VAT1-209ENST00000592388 NKX1-2Q9UD57 310 aaPredicted RBP6.12□□□□□ -1.43
VAT1-209ENST00000592388 ATPIF1Q9UII2 106 aa6.12□□□□□ -1.43
VAT1-209ENST00000592388 TMCC3Q9ULS5 477 aa6.12□□□□□ -1.43
VAT1-209ENST00000592388 SAMD4AQ9UPU9 718 aaKnown RBP6.12□□□□□ -1.43
VAT1-209ENST00000592388 LRCH1Q9Y2L9 728 aa6.12□□□□□ -1.43
VAT1-209ENST00000592388 HUWE1Q7Z6Z7 4374 aaKnown RBP6.11□□□□□ -1.43
VAT1-209ENST00000592388 ZNF816-ZNF321PA0A0X1KG74 233 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 TVP23AA6NH52 213 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 ARPC2O15144 300 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 OR10H3O60404 316 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 GADD45GO95257 159 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 RENP00797 406 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 HLA-DQA2P01906 255 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 LCATP04180 440 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 IGLL1P15814 213 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 TUBG1P23258 451 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 CRABP1P29762 137 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 RRM2P31350 389 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 PITPNBP48739 271 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 SRP9P49458 86 aaKnown RBP6.11□□□□□ -1.43
VAT1-209ENST00000592388 RAD23AP54725 363 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 RPL15P61313 204 aaKnown RBP6.11□□□□□ -1.43
VAT1-209ENST00000592388 FGF12P61328 243 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 TRAP1Q12931 704 aaKnown RBP6.11□□□□□ -1.43
VAT1-209ENST00000592388 TMED1Q13445 227 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 KRT72Q14CN4 511 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 RFX4Q33E94 735 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 SFRP4Q6FHJ7 346 aaPredicted RBP6.11□□□□□ -1.43
VAT1-209ENST00000592388 PGBD2Q6P3X8 592 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 COLCA1Q6ZS62 124 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 LNX2Q8N448 690 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 FITM2Q8N6M3 262 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 BOLLQ8N9W6 283 aaKnown RBP6.11□□□□□ -1.43
VAT1-209ENST00000592388 OR8B3Q8NGG8 313 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 OR51L1Q8NGJ5 315 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 OR5L1Q8NGL2 311 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 OR8D4Q8NGM9 314 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 SLCO4A1Q96BD0 722 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 UPRTQ96BW1 309 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 COG8Q96MW5 612 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 OR8B2Q96RD0 313 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 ATF6BQ99941 703 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 NUDT16L1Q9BRJ7 211 aaKnown RBP6.11□□□□□ -1.43
VAT1-209ENST00000592388 MMADHCQ9H3L0 296 aaPredicted RBP6.11□□□□□ -1.43
VAT1-209ENST00000592388 EGLN3Q9H6Z9 239 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 SMURF1Q9HCE7 757 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 KRCC1Q9NPI7 259 aaPredicted RBP6.11□□□□□ -1.43
VAT1-209ENST00000592388 TUBG2Q9NRH3 451 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 RRP15Q9Y3B9 282 aaKnown RBP6.11□□□□□ -1.43
VAT1-209ENST00000592388 POMT1Q9Y6A1 747 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 DNAH7Q8WXX0 4024 aa6.11□□□□□ -1.43
VAT1-209ENST00000592388 STAB2Q8WWQ8 2551 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 A0A1B0GW55 424 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 A0A1B0GWJ7 208 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 ERICH4A6NGS2 130 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 J3QW42 95 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 M0R135 149 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 ARPC3O15145 178 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 FCN3O75636 299 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 GYPBP06028 91 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 DUX4L2P0CJ85 424 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 DUX4L3P0CJ86 424 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 DUX4L4P0CJ87 422 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 DUX4L5P0CJ88 424 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 DUX4L6P0CJ89 424 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 DUX4L7P0CJ90 424 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 SLC2A1P11166 492 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 ATP6V1B2P21281 511 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 CA6P23280 308 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 NOS3P29474 1203 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 GATA4P43694 442 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 GSSP48637 474 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 ELF3P78545 371 aaPredicted RBP6.1□□□□□ -1.43
VAT1-209ENST00000592388 ZNF92Q03936 586 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.1□□□□□ -1.43
VAT1-209ENST00000592388 PPP1R8Q12972 351 aaKnown RBP6.1□□□□□ -1.43
VAT1-209ENST00000592388 NSUN5P1Q3KNT7 163 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 GLYATL3Q5SZD4 288 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 WDR25Q64LD2 544 aaPredicted RBP6.1□□□□□ -1.43
VAT1-209ENST00000592388 PGM2L1Q6PCE3 622 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 DUX4L9Q6RFH8 374 aaPredicted RBP6.1□□□□□ -1.43
VAT1-209ENST00000592388 BTNL3Q6UXE8 466 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 ZNF841Q6ZN19 808 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 ZNF826PQ6ZT77 177 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 NLRC3Q7RTR2 1065 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 MRPL21Q7Z2W9 205 aaKnown RBP6.1□□□□□ -1.43
VAT1-209ENST00000592388 ZBTB46Q86UZ6 589 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 FGFRL1Q8N441 504 aa6.1□□□□□ -1.43
VAT1-209ENST00000592388 PROKR2Q8NFJ6 384 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms