RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 MPPED2Q15777 294 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 ATP6AP1Q15904 470 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 ZNF181Q2M3W8 571 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 ESCO2Q56NI9 601 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 LIPNQ5VXI9 398 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 FAHD1Q6P587 224 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 C1QL2Q7Z5L3 287 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 C1orf87Q8N0U7 546 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 CELF2-AS1Q8N7Q2 184 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 OR11L1Q8NGX0 322 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 OR5K1Q8NHB7 308 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 OTOSQ8NHW6 89 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 THEM6Q8WUY1 208 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 NRBF2Q96F24 287 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 C19orf24Q9BVV8 132 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 SLC22A4Q9H015 551 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 C7orf69Q9H7B7 122 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 BRD7Q9NPI1 651 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 TVP23BQ9NYZ1 205 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 KLHDC2Q9Y2U9 406 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 NOP16Q9Y3C1 178 aaKnown RBP12.75□□□□□ -0.37
ERCC1-213ENST00000592023 SVEP1Q4LDE5 3571 aa12.75□□□□□ -0.37
ERCC1-213ENST00000592023 ATRQ13535 2644 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 PPIAL4EA0A075B759 164 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 PPIAL4DF5H284 164 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 M0R129 80 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 MITFO75030 526 aaPredicted RBP12.74□□□□□ -0.37
ERCC1-213ENST00000592023 PPIAL4FP0DN26 164 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 SLC2A5P22732 501 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 GATA3P23771 443 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 DAPP51397 102 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 CRISP1P54107 249 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 HOXA4Q00056 320 aaPredicted RBP12.74□□□□□ -0.37
ERCC1-213ENST00000592023 SCGB2A2Q13296 93 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 APOFQ13790 326 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 SNAPC1Q16533 368 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 SLC35D3Q5M8T2 416 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 SLC16A9Q7RTY1 509 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 PARP8Q8N3A8 854 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 TEX29Q8N6K0 151 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 C19orf18Q8NEA5 215 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 SPSB4Q96A44 273 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 REEP6Q96HR9 211 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 MMP26Q9NRE1 261 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 KRT84Q9NSB2 600 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 MRPL15Q9P015 296 aaKnown RBP12.74□□□□□ -0.37
ERCC1-213ENST00000592023 OR5V1Q9UGF6 321 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 PPIAL4AQ9Y536 164 aa12.74□□□□□ -0.37
ERCC1-213ENST00000592023 ARHGAP32A7KAX9 2087 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 A8MXK9 166 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 GMDSO60547 372 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 APOC1P02654 83 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 MRPL3P09001 348 aaKnown RBP12.73□□□□□ -0.37
ERCC1-213ENST00000592023 FASP25445 335 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 ZNF404Q494X3 552 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 LRRN1Q6UXK5 716 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 PRSS45Q7RTY3 260 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 KLBQ86Z14 1044 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.73□□□□□ -0.37
ERCC1-213ENST00000592023 ZNF454Q8N9F8 522 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 BOLLQ8N9W6 283 aaKnown RBP12.73□□□□□ -0.37
ERCC1-213ENST00000592023 Q8TCH9 128 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 PGAM5Q96HS1 289 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 TMEM246Q9BRR3 403 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 SSBP3Q9BWW4 388 aaPredicted RBP12.73□□□□□ -0.37
ERCC1-213ENST00000592023 OR10A2Q9H208 303 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 MMADHCQ9H3L0 296 aaPredicted RBP12.73□□□□□ -0.37
ERCC1-213ENST00000592023 SP140LQ9H930 580 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 FN3KRPQ9HA64 309 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 OPN4Q9UHM6 478 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 LRCH1Q9Y2L9 728 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 AP4S1Q9Y587 144 aa12.73□□□□□ -0.37
ERCC1-213ENST00000592023 PPIAL4CA0A0B4J2A2 164 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.72□□□□□ -0.37
ERCC1-213ENST00000592023 hCG_38984A0A1B0GV85 526 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 CCDC182A6NF36 153 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 A6NLC8 198 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 ANKRD30BLA7E2S9 258 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 G3V2T6 193 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 TRAPPC2LH3BP13 241 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 PRKYO43930 277 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 CIB2O75838 187 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 CD80P33681 288 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 FAM3AP98173 230 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 PTGES3Q15185 160 aaKnown RBP12.72□□□□□ -0.37
ERCC1-213ENST00000592023 LCN1P1Q5VSP4 162 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 AMIGO2Q86SJ2 522 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 DEFB108BQ8NET1 73 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 OR8B3Q8NGG8 313 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 OR52H1Q8NGJ2 320 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 OR8S1Q8NH09 359 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 ERGIC1Q969X5 290 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 SGK3Q96BR1 496 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 NEIL1Q96FI4 390 aaPredicted RBP12.72□□□□□ -0.37
ERCC1-213ENST00000592023 OR8B2Q96RD0 313 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 TTTY10Q9BZA0 68 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 PRRG3Q9BZD7 231 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 C1orf123Q9NWV4 160 aa12.72□□□□□ -0.37
ERCC1-213ENST00000592023 ZNF319Q9P2F9 582 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms