RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 OTX1P32242 354 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-227ENST00000591849 GNALP38405 381 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 DDOSTP39656 456 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 ALDH3A2P51648 485 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 RIDAP52758 137 aaKnown RBP8.53□□□□□ -1.04
BRCA1-227ENST00000591849 SNCBQ16143 134 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 CHRFAM7AQ494W8 412 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 MOGAT3Q86VF5 341 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 COMMD2Q86X83 199 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 SLC35F2Q8IXU6 374 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 C1orf87Q8N0U7 546 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 PQLC1Q8N2U9 271 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 OR8J1Q8NGP2 316 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 OR8S1Q8NH09 359 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 FAM81AQ8TBF8 368 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 RFKQ969G6 155 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 SGK3Q96BR1 496 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 AMELYQ99218 206 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 MNTQ99583 582 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 REPIN1Q9BWE0 567 aaKnown RBP8.53□□□□□ -1.04
BRCA1-227ENST00000591849 GABARAPL3Q9BY60 117 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 LPAR2Q9HBW0 351 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 USE1Q9NZ43 259 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 LPAR3Q9UBY5 353 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 WARS2Q9UGM6 360 aaKnown RBP8.53□□□□□ -1.04
BRCA1-227ENST00000591849 NPTNQ9Y639 398 aa8.53□□□□□ -1.04
BRCA1-227ENST00000591849 ATRQ13535 2644 aa8.52□□□□□ -1.04
BRCA1-227ENST00000591849 SONP18583 2426 aaKnown RBP8.52□□□□□ -1.05
BRCA1-227ENST00000591849 TMEM269A0A1B0GVZ9 245 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 SNTNA6NMZ2 147 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 WNT9BO14905 357 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 RRP9O43818 475 aaKnown RBP8.52□□□□□ -1.05
BRCA1-227ENST00000591849 GMDSO60547 372 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF254O75437 659 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 CRLF1O75462 422 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 ALPLP05186 524 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 IL2RGP31785 369 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 POU4F2Q12837 409 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF829Q3KNS6 432 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-227ENST00000591849 SPRNQ5BIV9 151 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 AADACL4Q5VUY2 407 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 DEGS2Q6QHC5 323 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 GLCCI1Q86VQ1 547 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 FTMTQ8N4E7 242 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 KLHL36Q8N4N3 616 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 SPERTQ8NA61 448 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 OR56B2PQ8NGI1 322 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 OR51G2Q8NGK0 314 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 OR51F2Q8NH61 342 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 TRUB1Q8WWH5 349 aaKnown RBP8.52□□□□□ -1.05
BRCA1-227ENST00000591849 HIST1H2AAQ96QV6 131 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 TBX5Q99593 518 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 ADAT1Q9BUB4 502 aaKnown RBP8.52□□□□□ -1.05
BRCA1-227ENST00000591849 TTTY10Q9BZA0 68 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 RGCCQ9H4X1 137 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF665Q9H7R5 613 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 FN3KRPQ9HA64 309 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 UFSP2Q9NUQ7 469 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 C14orf119Q9NWQ9 140 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 MRPL15Q9P015 296 aaKnown RBP8.52□□□□□ -1.05
BRCA1-227ENST00000591849 CDC42EP3Q9UKI2 254 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 KLHDC2Q9Y2U9 406 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 LRP12Q9Y561 859 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 GMPPBQ9Y5P6 360 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 COL6A5A8TX70 2615 aa8.52□□□□□ -1.05
BRCA1-227ENST00000591849 ABCA1O95477 2261 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 C5orf63A6NC05 138 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 ACOD1A6NK06 481 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 A6NLC8 198 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 ANXA2P2A6NMY6 339 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 MLNRO43193 412 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 IFNA2P01563 188 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 KRT8P05787 483 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 GRPP07492 148 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 HTR1FP30939 366 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 SRP14P37108 136 aaKnown RBP8.51□□□□□ -1.05
BRCA1-227ENST00000591849 GSK3AP49840 483 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 CXCR4P61073 352 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 FAM3AP98173 230 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF322Q6U7Q0 402 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-227ENST00000591849 KLBQ86Z14 1044 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF679Q8IYX0 411 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 SPICQ8N5J4 248 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 BOLLQ8N9W6 283 aaKnown RBP8.51□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF555Q8NEP9 628 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 CSNK2A3Q8NEV1 391 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 OR10H4Q8NGA5 316 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 ZNF420Q8TAQ5 688 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-227ENST00000591849 ERGIC1Q969X5 290 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 OR8B4Q96RC9 309 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 APOL4Q9BPW4 351 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 GCM1Q9NP62 436 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 CLN6Q9NWW5 311 aa8.51□□□□□ -1.05
BRCA1-227ENST00000591849 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.51□□□□□ -1.05
BRCA1-227ENST00000591849 hCG_1807616A0A1W2PRN6 198 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 TMEM178BH3BS89 294 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 CYB5R3P00387 301 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-227ENST00000591849 MSMBP08118 114 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 OR2T7P0C7T2 308 aa8.5□□□□□ -1.05
BRCA1-227ENST00000591849 MDH2P40926 338 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms