RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 DOK1Q99704 481 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 TMEM204Q9BSN7 226 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 WACQ9BTA9 647 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 MRI1Q9BV20 369 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 ABHD6Q9BV23 337 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 YIPF3Q9GZM5 350 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 MARCH7Q9H992 704 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 AMBNQ9NP70 447 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 DYNLRB1Q9NP97 96 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 CA10Q9NS85 328 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 FAIMQ9NVQ4 179 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 PTTG3PQ9NZH4 202 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 EIF3KQ9UBQ5 218 aaKnown RBP5.51□□□□□ -1.53
VPS4B-205ENST00000591383 ATPIF1Q9UII2 106 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 COPS3Q9UNS2 423 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 PLEKHA6Q9Y2H5 1048 aa5.51□□□□□ -1.53
VPS4B-205ENST00000591383 MAP1AP78559 2803 aaPredicted RBP5.51□□□□□ -1.53
VPS4B-205ENST00000591383 CSMD1Q96PZ7 3565 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 DSCAMO60469 2012 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 E9PQ18 207 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 TNFRSF6BO95407 300 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 SBK2P0C263 348 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 OR4A8P0C604 315 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 COX5BP10606 129 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 GABRB1P18505 474 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 NR4A1P22736 598 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 THBS4P35443 961 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 SLC15A1P46059 708 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 RGS6P49758 472 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 UCP3P55916 312 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 TPTEP56180 551 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 CXCR4P61073 352 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 PPP1CBP62140 327 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 SNRPD2P62316 118 aaKnown RBP5.5□□□□□ -1.53
VPS4B-205ENST00000591383 GRB2P62993 217 aaKnown RBP5.5□□□□□ -1.53
VPS4B-205ENST00000591383 ACTC1P68032 377 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 ACTA1P68133 377 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 HIST1H3AP68431 136 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 ADARB1P78563 741 aaKnown RBP5.5□□□□□ -1.53
VPS4B-205ENST00000591383 ECH1Q13011 328 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 TIGD6Q17RP2 521 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 ALKBH6Q3KRA9 238 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 GAGE13Q4V321 117 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 TEX30Q5JUR7 227 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 HIST2H3PS2Q5TEC6 136 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 LIN54Q6MZP7 749 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 RGS7BPQ6MZT1 257 aaPredicted RBP5.5□□□□□ -1.53
VPS4B-205ENST00000591383 ARL9Q6T311 187 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 ZNF322Q6U7Q0 402 aaPredicted RBP5.5□□□□□ -1.53
VPS4B-205ENST00000591383 PLEKHG7Q6ZR37 379 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 AHSA2Q719I0 299 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 HIST2H3AQ71DI3 136 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.5□□□□□ -1.53
VPS4B-205ENST00000591383 NUP37Q8NFH4 326 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 TMEM171Q8WVE6 324 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 IPCEF1Q8WWN9 437 aaPredicted RBP5.5□□□□□ -1.53
VPS4B-205ENST00000591383 LGALS12Q96DT0 336 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 POM121L2Q96KW2 1035 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 C4orf45Q96LM5 186 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 DHRS9Q9BPW9 319 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 RHNO1Q9BSD3 238 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 BCL2L14Q9BZR8 327 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 LIME1Q9H400 295 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 Q9H521 79 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 ELOVL3Q9HB03 270 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 PNRC2Q9NPJ4 139 aaKnown RBP5.5□□□□□ -1.53
VPS4B-205ENST00000591383 DDX28Q9NUL7 540 aaKnown RBP5.5□□□□□ -1.53
VPS4B-205ENST00000591383 CISD1Q9NZ45 108 aaKnown RBP5.5□□□□□ -1.53
VPS4B-205ENST00000591383 GNG8Q9UK08 70 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 SLC45A2Q9UMX9 530 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 LAMP3Q9UQV4 416 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 CMAHPQ9Y471 501 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 LRP12Q9Y561 859 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 TMEM14AQ9Y6G1 99 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 CSMD2Q7Z408 3487 aa5.5□□□□□ -1.53
VPS4B-205ENST00000591383 A0A1W2PQL4 384 aaPredicted RBP5.49□□□□□ -1.53
VPS4B-205ENST00000591383 DAPL1A0PJW8 107 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 ZNF785A8K8V0 405 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 PRR32B1ATL7 298 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 H0YJX3 145 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 PHYHO14832 338 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 MAGEB4O15481 346 aaPredicted RBP5.49□□□□□ -1.53
VPS4B-205ENST00000591383 XPNPEP2O43895 674 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 TIMM8AO60220 97 aaPredicted RBP5.49□□□□□ -1.53
VPS4B-205ENST00000591383 WBP4O75554 376 aaKnown RBP5.49□□□□□ -1.53
VPS4B-205ENST00000591383 RPP14O95059 124 aaKnown RBP5.49□□□□□ -1.53
VPS4B-205ENST00000591383 RAF1P04049 648 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 LCATP04180 440 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 KRT8P05787 483 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 GRPP07492 148 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 SOD3P08294 240 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 ACSM4P0C7M7 580 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 ZNF35P13682 527 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 MYL12AP19105 171 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 BTF3P20290 206 aaKnown RBP5.49□□□□□ -1.53
VPS4B-205ENST00000591383 MYF6P23409 242 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 DNASE1P24855 282 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 PCSK6P29122 969 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 GCH1P30793 250 aa5.49□□□□□ -1.53
VPS4B-205ENST00000591383 CDKN1AP38936 164 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms