RNA–Protein interactions for RNA: ENST00000591341.1

NDUFA11-204, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

TSL 2

Gene NDUFA11, Length 403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-204ENST00000591341 C1orf87Q8N0U7 546 aa13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 PAPD5Q8NDF8 572 aaKnown RBP13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 OR56B2PQ8NGI1 322 aa13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 OR11L1Q8NGX0 322 aa13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 Q8TCH9 128 aa13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 RNF133Q8WVZ7 376 aa13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 ZMYND19Q96E35 227 aaPredicted RBP13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 SSBP3Q9BWW4 388 aaPredicted RBP13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 SLC22A4Q9H015 551 aa13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 ZNF556Q9HAH1 456 aa13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 DNAJC27Q9NZQ0 273 aa13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 DNAJB9Q9UBS3 223 aa13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 MIOXQ9UGB7 285 aa13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 LRCH1Q9Y2L9 728 aa13.56□□□□□ -0.24
NDUFA11-204ENST00000591341 PRR23D1E9PI22 279 aaPredicted RBP13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 XRCC2O43543 280 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 GMDSO60547 372 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 SELENOFO60613 162 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 PRR23D2P0DMB1 279 aaPredicted RBP13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 HOXB6P17509 224 aaKnown RBP13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 PAICSP22234 425 aaKnown RBP13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 HSD11B1P28845 292 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 SLC15A1P46059 708 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 HILS1P60008 231 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 CDK5Q00535 292 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 TMEM236Q5W0B7 351 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 ERGIC1Q969X5 290 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 SPSB4Q96A44 273 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 SGK3Q96BR1 496 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 NEIL1Q96FI4 390 aaPredicted RBP13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 CADM1Q9BY67 442 aaKnown RBP13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 TOR3AQ9H497 397 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 YY1AP1Q9H869 796 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 NTN4Q9HB63 628 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 MRPL15Q9P015 296 aaKnown RBP13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 OR5V1Q9UGF6 321 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 AUP1Q9Y679 476 aa13.55□□□□□ -0.24
NDUFA11-204ENST00000591341 GSC2O15499 205 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 TIPRLO75663 272 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 FSTL3O95633 263 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 PTBP3O95758 552 aaKnown RBP13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 HMGN1P05114 100 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 ANXA8P13928 327 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 CD80P33681 288 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 ZNF121P58317 390 aaPredicted RBP13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 GNB2P62879 340 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 FAM3AP98173 230 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 PAX2Q02962 417 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 KLHL12Q53G59 568 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 KLF17Q5JT82 389 aaPredicted RBP13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 USP43Q70EL4 1123 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 FAM57BQ71RH2 274 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 SHFQ7M4L6 423 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 SLC16A9Q7RTY1 509 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 PRSS45Q7RTY3 260 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 CPOQ8IVL8 374 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 BPIFB2Q8N4F0 458 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 BOLLQ8N9W6 283 aaKnown RBP13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 BBS1Q8NFJ9 593 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 OR8B3Q8NGG8 313 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 OR8B2Q96RD0 313 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 MRI1Q9BV20 369 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 SUCNR1Q9BXA5 334 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 OPA3Q9H6K4 179 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 FN3KRPQ9HA64 309 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 BRD7Q9NPI1 651 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 ZNF319Q9P2F9 582 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 RNF7Q9UBF6 113 aa13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 NOP16Q9Y3C1 178 aaKnown RBP13.54□□□□□ -0.24
NDUFA11-204ENST00000591341 GRPP07492 148 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 H2BFMP0C1H6 154 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 CPT2P23786 658 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 OPRL1P41146 370 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 NAA10P41227 235 aaPredicted RBP13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 PITPNBP48739 271 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 PAX8Q06710 450 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 TIGD6Q17RP2 521 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 ARMCX4Q5H9R4 360 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 SFRP4Q6FHJ7 346 aaPredicted RBP13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 DCDC5Q6ZRR9 648 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 ZNF826PQ6ZT77 177 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 THEM6Q8WUY1 208 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 ZFAND2BQ8WV99 257 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 REEP6Q96HR9 211 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 PLEKHA8Q96JA3 519 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 PPP1R3EQ9H7J1 279 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 SLC25A19Q9HC21 320 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 ESM1Q9NQ30 184 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 C1orf123Q9NWV4 160 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 KLHDC2Q9Y2U9 406 aa13.53□□□□□ -0.24
NDUFA11-204ENST00000591341 IGHV2-70DA0A0C4DH43 119 aa13.52□□□□□ -0.25
NDUFA11-204ENST00000591341 hCG_38984A0A1B0GV85 526 aa13.52□□□□□ -0.25
NDUFA11-204ENST00000591341 PRODHO43272 600 aa13.52□□□□□ -0.25
NDUFA11-204ENST00000591341 APOC1P02654 83 aa13.52□□□□□ -0.25
NDUFA11-204ENST00000591341 LYNP07948 512 aa13.52□□□□□ -0.25
NDUFA11-204ENST00000591341 FPR2P25090 351 aa13.52□□□□□ -0.25
NDUFA11-204ENST00000591341 BNIP1Q12981 228 aa13.52□□□□□ -0.25
NDUFA11-204ENST00000591341 GFOD2Q3B7J2 385 aa13.52□□□□□ -0.25
NDUFA11-204ENST00000591341 NLRC3Q7RTR2 1065 aa13.52□□□□□ -0.25
NDUFA11-204ENST00000591341 BCL6BQ8N143 479 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms