RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 BBS10Q8TAM1 723 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 MRAPQ8TCY5 172 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 SFXN5Q8TD22 340 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 ABHD3Q8WU67 409 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 TM4SF18Q96CE8 201 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 RBM18Q96H35 190 aaKnown RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 MED30Q96HR3 178 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 ADGRG7Q96K78 797 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 PRRC1Q96M27 445 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 IL4I1Q96RQ9 567 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF607Q96SK3 696 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 THAP7Q9BT49 309 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 TMEM43Q9BTV4 400 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 DPCDQ9BVM2 203 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 MS4A8Q9BY19 250 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 RTN4RQ9BZR6 473 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 ROGDIQ9GZN7 287 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 RANGRFQ9HD47 186 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 EXOSC4Q9NPD3 245 aaKnown RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 TIGARQ9NQ88 270 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 DDX28Q9NUL7 540 aaKnown RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 MED17Q9NVC6 651 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 PAQR5Q9NXK6 330 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 AHSPQ9NZD4 102 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 PTTG3PQ9NZH4 202 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 EXOGQ9Y2C4 368 aaKnown RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 MRPS18CQ9Y3D5 142 aaKnown RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 A0A0G2JMP0 313 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 C7orf66A4D0T2 115 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ANKRD61A6NGH8 418 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 B4DSR2 109 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ATP6V1G2-DDX39BF2Z307 99 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 J3QRE1 110 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 PLPP1O14494 284 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 CXCL13O43927 109 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 PNPP00491 289 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 BCHEP06276 602 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 KLK1P06870 262 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 IGFBP1P08833 259 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-209ENST00000589941 NPSP0C0P6 89 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 M6PRP20645 277 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 HIST1H1TP22492 207 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-209ENST00000589941 FPR3P25089 353 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 P2RX3P56373 397 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ARPC4P59998 168 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 RPS25P62851 125 aaKnown RBP6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF155Q12901 538 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-209ENST00000589941 SCGB2A2Q13296 93 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 GINS1Q14691 196 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 EXOSC7Q15024 291 aaKnown RBP6.6□□□□□ -1.35
SMAD4-209ENST00000589941 HSD17B12Q53GQ0 312 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 KPRPQ5T749 579 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-209ENST00000589941 AADACL4Q5VUY2 407 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 KHDRBS2Q5VWX1 349 aaKnown RBP6.6□□□□□ -1.35
SMAD4-209ENST00000589941 LIPKQ5VXJ0 399 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ASPHD2Q6ICH7 369 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ACSM5Q6NUN0 579 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 MZT2BQ6NZ67 158 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 PAQR6Q6TCH4 344 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF782Q6ZMW2 699 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-209ENST00000589941 RASSF6Q6ZTQ3 369 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 NUP54Q7Z3B4 507 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 C6orf120Q7Z4R8 191 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ZER1Q7Z7L7 766 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 COMTD1Q86VU5 262 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 BPIFB2Q8N4F0 458 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 FADS6Q8N9I5 356 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 OR2M3Q8NG83 312 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 OR4K17Q8NGC6 315 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 OR4K5Q8NGD3 323 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 OR52N5Q8NH56 324 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 OR5AK3PQ8NH89 298 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 CLDND2Q8NHS1 167 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 RNF138Q8WVD3 245 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 DNAJA4Q8WW22 397 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ACOT12Q8WYK0 555 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 UFD1Q92890 307 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ARHGDIGQ99819 225 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ATF6BQ99941 703 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 CITED1Q99966 193 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 PRRG4Q9BZD6 226 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 MMP28Q9H239 520 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 OR51B5Q9H339 312 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 PLSCR3Q9NRY6 295 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF275Q9NSD4 429 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-209ENST00000589941 GIMAP4Q9NUV9 329 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 FLRT3Q9NZU0 649 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 P2RX2Q9UBL9 471 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 NUFIP1Q9UHK0 495 aaKnown RBP6.6□□□□□ -1.35
SMAD4-209ENST00000589941 GSTK1Q9Y2Q3 226 aa6.6□□□□□ -1.35
SMAD4-209ENST00000589941 TET2Q6N021 2002 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-209ENST00000589941 A0A0X1KG70 313 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 SNTNA6NMZ2 147 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 C5orf58C9J3I9 102 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 M0QZ24 198 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 M0R1B8 84 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 TNFSF11O14788 317 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 RGS5O15539 181 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 LYRM1O43325 122 aa6.59□□□□□ -1.35
SMAD4-209ENST00000589941 GMFGO60234 142 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms