RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 GPR84Q9NQS5 396 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 CBLN4Q9NTU7 201 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 FRRS1LQ9P0K9 344 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 TAAR3PQ9P1P4 343 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 PURGQ9UJV8 347 aaKnown RBP11.68□□□□□ -0.54
VMP1-210ENST00000589823 FBXO9Q9UK97 447 aaPredicted RBP11.68□□□□□ -0.54
VMP1-210ENST00000589823 EDARQ9UNE0 448 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 ABCA4P78363 2273 aa11.68□□□□□ -0.54
VMP1-210ENST00000589823 A0A1B0GVI7 797 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 TMEM212A6NML5 194 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 P2RY10O00398 339 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 MTRF1O75570 445 aaKnown RBP11.67□□□□□ -0.54
VMP1-210ENST00000589823 RPSAP08865 295 aaKnown RBP11.67□□□□□ -0.54
VMP1-210ENST00000589823 DANCRP0C864 163 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 KITLGP21583 273 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 DDOSTP39656 456 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 MAP2K4P45985 399 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 GSK3AP49840 483 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 GTF2A1P52655 376 aaPredicted RBP11.67□□□□□ -0.54
VMP1-210ENST00000589823 FAM3AP98173 230 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 BDH1Q02338 343 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 CDK5R1Q15078 307 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 OR2T2Q6IF00 324 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 DOK3Q7L591 496 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 DTX2Q86UW9 622 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 SPARTQ8N0X7 666 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 OR5AK2Q8NH90 309 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
VMP1-210ENST00000589823 FAM71F1Q96KD3 344 aaPredicted RBP11.67□□□□□ -0.54
VMP1-210ENST00000589823 LYZL4Q96KX0 146 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 OR5M11Q96RB7 305 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 ZNF696Q9H7X3 374 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 DYNLRB1Q9NP97 96 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 ACOT13Q9NPJ3 140 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 MYEF2Q9P2K5 600 aaKnown RBP11.67□□□□□ -0.54
VMP1-210ENST00000589823 ST6GALNAC2Q9UJ37 374 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 LAMP3Q9UQV4 416 aa11.67□□□□□ -0.54
VMP1-210ENST00000589823 LSM2Q9Y333 95 aaKnown RBP11.67□□□□□ -0.54
VMP1-210ENST00000589823 NBPF19A0A087WUL8 3843 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 A0A087WXM4 84 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 hCG_38984A0A1B0GV85 526 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 PLSCR5A0PG75 271 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 TRIM64A6NGJ6 449 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 OR4C45A6NMZ5 311 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 IQCF6A8MYZ5 107 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 OGG1O15527 345 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 SYT7O43581 403 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 LALBAP00709 142 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 IGLV3-1P01715 115 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 SOD3P08294 240 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 HSMCR30P0CW71 290 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 ATP6V1B1P15313 513 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 ZNF12P17014 697 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 LIPAP38571 399 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 MAP2K3P46734 347 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 PRSS12P56730 875 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 EMX1Q04741 257 aaPredicted RBP11.66□□□□□ -0.54
VMP1-210ENST00000589823 SLC3A1Q07837 685 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 ACSM1Q08AH1 577 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 SWI5Q1ZZU3 235 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 MST1LQ2TV78 715 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 ZMAT1Q5H9K5 638 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 XAF1Q6GPH4 301 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 ZNF367Q7RTV3 350 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 OR5AS1Q8N127 324 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 ZFP41Q8N8Y5 198 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 BHLHE23Q8NDY6 225 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 CCDC54Q8NEL0 328 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 TSPAN14Q8NG11 270 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 FCGR1BQ92637 280 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 ITFG2Q969R8 447 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 SMIM19Q96E16 107 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 CCL19Q99731 98 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 TRAF4Q9BUZ4 470 aaPredicted RBP11.66□□□□□ -0.54
VMP1-210ENST00000589823 ISYNA1Q9NPH2 558 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 CYSLTR2Q9NS75 346 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 CGGBP1Q9UFW8 167 aaPredicted RBP11.66□□□□□ -0.54
VMP1-210ENST00000589823 PMF1-BGLAPU3KQ54 211 aa11.66□□□□□ -0.54
VMP1-210ENST00000589823 PNMA8CA0A1B0GUJ8 204 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 LOC107986453A0A1B0GWG9 222 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 LOC390937A0A1W2PQ73 354 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 CD300LBA8K4G0 201 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 M0R233 179 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 DHRS3O75911 302 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 ISG15P05161 165 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 CELP19835 753 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 ACHEP22303 614 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 ALDH3B1P43353 468 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 KRTAP10-9P60411 292 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 OR8B8Q15620 311 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 ALKBH6Q3KRA9 238 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 DMKNQ6E0U4 476 aaPredicted RBP11.65□□□□□ -0.54
VMP1-210ENST00000589823 C11orf71Q6IPW1 123 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 PAMR1Q6UXH9 720 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 RDH10Q8IZV5 341 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 FTMTQ8N4E7 242 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 CSNK2A3Q8NEV1 391 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 SEMA6DQ8NFY4 1073 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 OR8G5Q8NG78 346 aa11.65□□□□□ -0.54
VMP1-210ENST00000589823 OR56B2PQ8NGI1 322 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms