RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SELENOVP59797 346 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 SLC3A1Q07837 685 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 MSMPQ1L6U9 139 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 TMEM244Q5VVB8 128 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 RDH10Q8IZV5 341 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 UFD1Q92890 307 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 MRPL24Q96A35 216 aaKnown RBP13.03□□□□□ -0.32
ATG4D-211ENST00000589753 MARVELD3Q96A59 401 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 HAVCR1Q96D42 359 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 OPALINQ96PE5 141 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 PDCD1LG2Q9BQ51 273 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 MRPS26Q9BYN8 205 aaKnown RBP13.03□□□□□ -0.32
ATG4D-211ENST00000589753 DUSP13Q9UII6 198 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 LRRK2Q5S007 2527 aa13.03□□□□□ -0.32
ATG4D-211ENST00000589753 GCN1Q92616 2671 aaKnown RBP13.03□□□□□ -0.32
ATG4D-211ENST00000589753 A0A1B0GTI1 187 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 hCG_38984A0A1B0GV85 526 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 A0A1B0GVI7 797 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 LOC107986453A0A1B0GWG9 222 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 GGT3PA6NGU5 568 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 SYT7O43581 403 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 PLPP2O43688 288 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 INMTO95050 263 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 CLPTM1O96005 669 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 CD1AP06126 327 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 SELEP16581 610 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 CCL1P22362 96 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 PSMB9P28065 219 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 SSTR2P30874 369 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 SERPINF1P36955 418 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 PRSS12P56730 875 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 KLF3P57682 345 aaPredicted RBP13.02□□□□□ -0.33
ATG4D-211ENST00000589753 FAM3AP98173 230 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 PSG7Q13046 419 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 GPR50Q13585 617 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 ARMCX4Q5H9R4 360 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 LIPKQ5VXJ0 399 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 HIST2H2BCQ6DN03 193 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 DOK3Q7L591 496 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 GHSRQ92847 366 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 FAM71F1Q96KD3 344 aaPredicted RBP13.02□□□□□ -0.33
ATG4D-211ENST00000589753 PGLYRP3Q96LB9 341 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 SYT3Q9BQG1 590 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 SOX7Q9BT81 388 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 MRPL37Q9BZE1 423 aaKnown RBP13.02□□□□□ -0.33
ATG4D-211ENST00000589753 PLK3Q9H4B4 646 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 UBTD1Q9HAC8 227 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 FAIMQ9NVQ4 179 aa13.02□□□□□ -0.33
ATG4D-211ENST00000589753 ICE1Q9Y2F5 2266 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 COL12A1Q99715 3063 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 IGLV3-9A0A075B6K5 115 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 LOC390937A0A1W2PQ73 354 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 MTRF1O75570 445 aaKnown RBP13.01□□□□□ -0.33
ATG4D-211ENST00000589753 IGHV3-13P01766 116 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 CPEP16870 476 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 KITLGP21583 273 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 ACHEP22303 614 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 TTKP33981 857 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 GSK3AP49840 483 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 TPBGQ13641 420 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 TSTQ16762 297 aaKnown RBP13.01□□□□□ -0.33
ATG4D-211ENST00000589753 SYT6Q5T7P8 510 aaPredicted RBP13.01□□□□□ -0.33
ATG4D-211ENST00000589753 ZNF787Q6DD87 383 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 OR2T2Q6IF00 324 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 LRP11Q86VZ4 500 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 FBXL14Q8N1E6 418 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 MUC15Q8N387 334 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 PLPP7Q8NBV4 271 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 CCDC54Q8NEL0 328 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 MUL1Q969V5 352 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 PURGQ9UJV8 347 aaKnown RBP13.01□□□□□ -0.33
ATG4D-211ENST00000589753 HHLA2Q9UM44 414 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 ZNF281Q9Y2X9 895 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 RTTNQ86VV8 2226 aa13.01□□□□□ -0.33
ATG4D-211ENST00000589753 A0A1W2PPW3 197 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 CD300LBA8K4G0 201 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 IQCF6A8MYZ5 107 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 H3BSH0 61 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 TIMM8AO60220 97 aaPredicted RBP13□□□□□ -0.33
ATG4D-211ENST00000589753 DHRS3O75911 302 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 ZNF12P17014 697 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 JUNBP17275 347 aaPredicted RBP13□□□□□ -0.33
ATG4D-211ENST00000589753 MAP2K3P46734 347 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 EVX1P49640 407 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 OR8B8Q15620 311 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 EFNB3Q15768 340 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 MOGQ16653 247 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 YIF1BQ5BJH7 314 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 TMEM255AQ5JRV8 349 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 Q6ZSR3 168 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 PHC2Q8IXK0 858 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 ZNF611Q8N823 705 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 OR56B2PQ8NGI1 322 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 OR14K1Q8NGZ2 314 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 OR10AC1Q8NH08 325 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 RGP1Q92546 391 aaPredicted RBP13□□□□□ -0.33
ATG4D-211ENST00000589753 ITFG2Q969R8 447 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 PLEKHF2Q9H8W4 249 aa13□□□□□ -0.33
ATG4D-211ENST00000589753 MYEF2Q9P2K5 600 aaKnown RBP13□□□□□ -0.33
ATG4D-211ENST00000589753 V9GYS6 101 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms