RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 RAB39BQ96DA2 213 aa6.98□□□□□ -1.29
DNMT1-219ENST00000589349 TSSK2Q96PF2 358 aa6.98□□□□□ -1.29
DNMT1-219ENST00000589349 OR52D1Q9H346 318 aa6.98□□□□□ -1.29
DNMT1-219ENST00000589349 FN3KQ9H479 309 aa6.98□□□□□ -1.29
DNMT1-219ENST00000589349 METTL17Q9H7H0 456 aaPredicted RBP6.98□□□□□ -1.29
DNMT1-219ENST00000589349 TBC1D23Q9NUY8 699 aa6.98□□□□□ -1.29
DNMT1-219ENST00000589349 HIF1ANQ9NWT6 349 aa6.98□□□□□ -1.29
DNMT1-219ENST00000589349 CACNG2Q9Y698 323 aa6.98□□□□□ -1.29
DNMT1-219ENST00000589349 U3KQV3 271 aa6.98□□□□□ -1.29
DNMT1-219ENST00000589349 RTTNQ86VV8 2226 aa6.98□□□□□ -1.29
DNMT1-219ENST00000589349 SONP18583 2426 aaKnown RBP6.98□□□□□ -1.29
DNMT1-219ENST00000589349 NIPBLQ6KC79 2804 aaeCLIP6.97□□□□□ -1.29
DNMT1-219ENST00000589349 IGHV3-64DA0A0J9YX35 117 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 F5H5K5 113 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 WNT9BO14905 357 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 KRT36O76013 467 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 IGHV3-13P01766 116 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 TFP02787 698 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 MSMBP08118 114 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 TACSTD2P09758 323 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 HIST1H1CP16403 213 aaKnown RBP6.97□□□□□ -1.29
DNMT1-219ENST00000589349 GATA3P23771 443 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.97□□□□□ -1.29
DNMT1-219ENST00000589349 SLC3A1Q07837 685 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 PPP1R8Q12972 351 aaKnown RBP6.97□□□□□ -1.29
DNMT1-219ENST00000589349 FHL1Q13642 323 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 SLC36A3Q495N2 470 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 FAM98BQ52LJ0 330 aaKnown RBP6.97□□□□□ -1.29
DNMT1-219ENST00000589349 ACSM5Q6NUN0 579 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 PTCHD4Q6ZW05 846 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 FAM122BQ7Z309 247 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 TSEN54Q7Z6J9 526 aaKnown RBP6.97□□□□□ -1.29
DNMT1-219ENST00000589349 PIGWQ7Z7B1 504 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 C1orf174Q8IYL3 243 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 NPEPL1Q8NDH3 523 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 BHLHE23Q8NDY6 225 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 SDR9C7Q8NEX9 313 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 GJC3Q8NFK1 279 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 OR9Q2Q8NGE9 314 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 TMEM186Q96B77 213 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 C7orf34Q96L11 122 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 COG8Q96MW5 612 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 GPA33Q99795 319 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 WACQ9BTA9 647 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 HCAR1Q9BXC0 346 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 EGLN3Q9H6Z9 239 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 REEP1Q9H902 201 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 WDR76Q9H967 626 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 IL1RAPQ9NPH3 570 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 NRIP3Q9NQ35 241 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 PURGQ9UJV8 347 aaKnown RBP6.97□□□□□ -1.29
DNMT1-219ENST00000589349 STARD10Q9Y365 291 aa6.97□□□□□ -1.29
DNMT1-219ENST00000589349 SAMHD1Q9Y3Z3 626 aaKnown RBP6.97□□□□□ -1.29
DNMT1-219ENST00000589349 NF1P21359 2839 aa6.96□□□□□ -1.29
DNMT1-219ENST00000589349 IGLV3-9A0A075B6K5 115 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 OR6C6A6NF89 314 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 TVP23AA6NH52 213 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 ZSCAN5BA6NJL1 495 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 FAM157AC9JC47 383 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 F5H697 171 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 H3BN98 237 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 SURF4O15260 269 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 MPPED1O15442 326 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 LCATP04180 440 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 CALB2P22676 271 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 FPR3P25089 353 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 POU1F1P28069 291 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 PYCR1P32322 319 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 CRYBB2P43320 205 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 RAD23AP54725 363 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 DVL1P1P54792 670 aaPredicted RBP6.96□□□□□ -1.3
DNMT1-219ENST00000589349 LSM6P62312 80 aaKnown RBP6.96□□□□□ -1.3
DNMT1-219ENST00000589349 MRPS11P82912 194 aaKnown RBP6.96□□□□□ -1.3
DNMT1-219ENST00000589349 PSG7Q13046 419 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 OR2T2Q6IF00 324 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 CYB561A3Q8NBI2 242 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 AQP11Q8NBQ7 271 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 ZBTB34Q8NCN2 500 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 OR51L1Q8NGJ5 315 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 SPRYD4Q8WW59 207 aaPredicted RBP6.96□□□□□ -1.3
DNMT1-219ENST00000589349 PTP4A1Q93096 173 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 ZNF582Q96NG8 517 aaPredicted RBP6.96□□□□□ -1.3
DNMT1-219ENST00000589349 THTPAQ9BU02 230 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 TSSK6Q9BXA6 273 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 TRIM15Q9C019 465 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 ZNF665Q9H7R5 613 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 CENPMQ9NSP4 180 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 TMEM160Q9NX00 188 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 CD300AQ9UGN4 299 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 B9D1Q9UPM9 204 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 WIPI2Q9Y4P8 454 aa6.96□□□□□ -1.3
DNMT1-219ENST00000589349 ZAR1LA6NP61 321 aa6.95□□□□□ -1.3
DNMT1-219ENST00000589349 TCF21O43680 179 aa6.95□□□□□ -1.3
DNMT1-219ENST00000589349 IDH3BO43837 385 aa6.95□□□□□ -1.3
DNMT1-219ENST00000589349 E2F6O75461 281 aa6.95□□□□□ -1.3
DNMT1-219ENST00000589349 SOX14O95416 240 aa6.95□□□□□ -1.3
DNMT1-219ENST00000589349 NUDT3O95989 172 aa6.95□□□□□ -1.3
DNMT1-219ENST00000589349 IFNGP01579 166 aa6.95□□□□□ -1.3
DNMT1-219ENST00000589349 SPARCP09486 303 aa6.95□□□□□ -1.3
DNMT1-219ENST00000589349 COX5BP10606 129 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms