RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 OR4K13Q8NH42 304 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 FANK1Q8TC84 345 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 LHX4Q969G2 390 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 MAP6Q96JE9 813 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 ADAT1Q9BUB4 502 aaKnown RBP11.56□□□□□ -0.56
VMP1-209ENST00000588915 SMURF1Q9HCE7 757 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 C14orf119Q9NWQ9 140 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 ABCD2Q9UBJ2 740 aa11.56□□□□□ -0.56
VMP1-209ENST00000588915 A0A1B0GVI7 797 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 OR6C68A6NDL8 312 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 GGT3PA6NGU5 568 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 C3orf80F5H4A9 247 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 DVL1O14640 695 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 CCDC22O60826 627 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 IGHV4-59P01825 116 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 HLA-DQA2P01906 255 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 MUC1P15941 1255 aaPredicted RBP11.55□□□□□ -0.56
VMP1-209ENST00000588915 GRK5P34947 590 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 IFNGR2P38484 337 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 PRSS12P56730 875 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 ARF6P62330 175 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 ZNF92Q03936 586 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 CDONQ4KMG0 1287 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 GLYATQ6IB77 296 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 GCSAMQ8N6F7 178 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 SCCPDHQ8NBX0 429 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 RNPEPL1Q9HAU8 725 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 TCF7L1Q9HCS4 588 aa11.55□□□□□ -0.56
VMP1-209ENST00000588915 ARGLU1Q9NWB6 273 aaPredicted RBP11.55□□□□□ -0.56
VMP1-209ENST00000588915 MRPL22Q9NWU5 206 aaKnown RBP11.55□□□□□ -0.56
VMP1-209ENST00000588915 RPUSD1Q9UJJ7 312 aaKnown RBP11.55□□□□□ -0.56
VMP1-209ENST00000588915 A0A0U1RQK1 487 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 BHLHE40O14503 412 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 GMNNO75496 209 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 TSPAN9O75954 239 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 FBP1P09467 338 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 NCK1P16333 377 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 FAM90A1Q86YD7 464 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 BOLLQ8N9W6 283 aaKnown RBP11.54□□□□□ -0.56
VMP1-209ENST00000588915 OR52J3Q8NH60 311 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 PKP2Q99959 881 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 IFT27Q9BW83 186 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 GORASP2Q9H8Y8 452 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 C1orf123Q9NWV4 160 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 CD300AQ9UGN4 299 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 FAM96BQ9Y3D0 163 aa11.54□□□□□ -0.56
VMP1-209ENST00000588915 C5orf63A6NC05 138 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 XRCC2O43543 280 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 OR10H3O60404 316 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 DIRAS1O95057 198 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 GADD45GO95257 159 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 GYPAP02724 150 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 TGFBR2P37173 567 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 GSSP48637 474 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 GUCA2AQ02747 115 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 MICBQ29980 383 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 SNAI3Q3KNW1 292 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 Q6ZSV7 163 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 SLC36A1Q7Z2H8 476 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 CMTM4Q8IZR5 234 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 LY6G5BQ8NDX9 201 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 SDR9C7Q8NEX9 313 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 OR2T4Q8NH00 348 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 DDOQ99489 341 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 KCNJ15Q99712 375 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 RASSF4Q9H2L5 321 aa11.53□□□□□ -0.56
VMP1-209ENST00000588915 BTBD17A6NE02 478 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 A6NLC8 198 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 FCN3O75636 299 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 TIPRLO75663 272 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 GRPP07492 148 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 EEF1B2P24534 225 aaKnown RBP11.52□□□□□ -0.57
VMP1-209ENST00000588915 HOXA4Q00056 320 aaPredicted RBP11.52□□□□□ -0.57
VMP1-209ENST00000588915 SF3A3Q12874 501 aaKnown RBP eCLIP11.52□□□□□ -0.57
VMP1-209ENST00000588915 TSPAN31Q12999 210 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 PCK2Q16822 640 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 C2orf68Q2NKX9 166 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 GLYATL3Q5SZD4 288 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 RPL13AP3Q6NVV1 102 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 ZNF826PQ6ZT77 177 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 VMO1Q7Z5L0 202 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 GALNT4Q8N4A0 578 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 OR56B2PQ8NGI1 322 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 OR2AE1Q8NHA4 323 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 SPSB4Q96A44 273 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 C12orf43Q96C57 262 aaKnown RBP11.52□□□□□ -0.57
VMP1-209ENST00000588915 PYURFQ96I23 114 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 CCDC134Q9H6E4 229 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 SP140LQ9H930 580 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 VPREB3Q9UKI3 123 aa11.52□□□□□ -0.57
VMP1-209ENST00000588915 hCG_1807616A0A1W2PRN6 198 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 ANKRD30BLA7E2S9 258 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 SEMG1P04279 462 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 H2AFXP16104 143 aaPredicted RBP11.51□□□□□ -0.57
VMP1-209ENST00000588915 NAA10P41227 235 aaPredicted RBP11.51□□□□□ -0.57
VMP1-209ENST00000588915 NUDT2P50583 147 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 PSME3P61289 254 aa11.51□□□□□ -0.57
VMP1-209ENST00000588915 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.51□□□□□ -0.57
VMP1-209ENST00000588915 SNCBQ16143 134 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms