RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 C1QTNF12Q5T7M4 302 aa19.29■□□□□ 0.68
ATG4D-209ENST00000588857 CROCCP3Q8IVE0 287 aa19.29■□□□□ 0.68
ATG4D-209ENST00000588857 PLPP7Q8NBV4 271 aa19.29■□□□□ 0.68
ATG4D-209ENST00000588857 OR2AE1Q8NHA4 323 aa19.29■□□□□ 0.68
ATG4D-209ENST00000588857 AKAP1Q92667 903 aaKnown RBP eCLIP19.29■□□□□ 0.68
ATG4D-209ENST00000588857 DACH2Q96NX9 599 aa19.29■□□□□ 0.68
ATG4D-209ENST00000588857 MMP27Q9H306 513 aa19.29■□□□□ 0.68
ATG4D-209ENST00000588857 PLEKHA1Q9HB21 404 aa19.29■□□□□ 0.68
ATG4D-209ENST00000588857 CDH20Q9HBT6 801 aa19.29■□□□□ 0.68
ATG4D-209ENST00000588857 SLC25A15Q9Y619 301 aa19.29■□□□□ 0.68
ATG4D-209ENST00000588857 CLEC18AA5D8T8 446 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 C16orf97H3BN30 126 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 LMX1BO60663 402 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 DHRS3O75911 302 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 PAX7P23759 505 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 CHRNB4P30926 498 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 GNALP38405 381 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 LSAMPQ13449 338 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 CLEC18BQ6UXF7 455 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 SERPINA12Q8IW75 414 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 PARP16Q8N5Y8 322 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 FAM169BQ8N8A8 192 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 CLEC18CQ8NCF0 446 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 AP3S1Q92572 193 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 SOX7Q9BT81 388 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 EIF3KQ9UBQ5 218 aaKnown RBP19.28■□□□□ 0.68
ATG4D-209ENST00000588857 FOXJ3Q9UPW0 622 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 A3GALT2U3KPV4 340 aa19.28■□□□□ 0.68
ATG4D-209ENST00000588857 TRAV8-7A0A075B6U6 113 aa19.27■□□□□ 0.68
ATG4D-209ENST00000588857 A0A1B0GUH1 482 aa19.27■□□□□ 0.68
ATG4D-209ENST00000588857 MALLQ13021 153 aa19.27■□□□□ 0.68
ATG4D-209ENST00000588857 PAQR4Q8N4S7 273 aaPredicted RBP19.27■□□□□ 0.68
ATG4D-209ENST00000588857 OR14K1Q8NGZ2 314 aa19.27■□□□□ 0.68
ATG4D-209ENST00000588857 C6orf62Q9GZU0 229 aaPredicted RBP19.27■□□□□ 0.68
ATG4D-209ENST00000588857 TAS2R4Q9NYW5 299 aa19.27■□□□□ 0.68
ATG4D-209ENST00000588857 AK6Q9Y3D8 172 aaKnown RBP19.27■□□□□ 0.68
ATG4D-209ENST00000588857 HEATR1Q9H583 2144 aaKnown RBP19.27■□□□□ 0.68
ATG4D-209ENST00000588857 LOC390937A0A1W2PQ73 354 aa19.27■□□□□ 0.67
ATG4D-209ENST00000588857 MAS1P04201 325 aa19.27■□□□□ 0.67
ATG4D-209ENST00000588857 FSTP19883 344 aa19.27■□□□□ 0.67
ATG4D-209ENST00000588857 CFL1P23528 166 aaKnown RBP19.27■□□□□ 0.67
ATG4D-209ENST00000588857 OR10A3P58181 314 aa19.27■□□□□ 0.67
ATG4D-209ENST00000588857 PPP3R1P63098 170 aa19.27■□□□□ 0.67
ATG4D-209ENST00000588857 SRSF1Q07955 248 aaKnown RBP eCLIP19.27■□□□□ 0.67
ATG4D-209ENST00000588857 PPA1Q15181 289 aa19.27■□□□□ 0.67
ATG4D-209ENST00000588857 SLC25A35Q3KQZ1 300 aa19.27■□□□□ 0.67
ATG4D-209ENST00000588857 MYPOPQ86VE0 399 aaPredicted RBP19.27■□□□□ 0.67
ATG4D-209ENST00000588857 NR2C2APQ86WQ0 139 aa19.27■□□□□ 0.67
ATG4D-209ENST00000588857 OR5D14Q8NGL3 314 aa19.27■□□□□ 0.67
ATG4D-209ENST00000588857 PRR7Q8TB68 274 aa19.27■□□□□ 0.67
ATG4D-209ENST00000588857 ADAT3Q96EY9 351 aaPredicted RBP19.27■□□□□ 0.67
ATG4D-209ENST00000588857 NXF2Q9GZY0 626 aaKnown RBP19.27■□□□□ 0.67
ATG4D-209ENST00000588857 PLEKHB1Q9UF11 243 aaPredicted RBP19.27■□□□□ 0.67
ATG4D-209ENST00000588857 V9GYS6 101 aa19.27■□□□□ 0.67
ATG4D-209ENST00000588857 PRR14LQ5THK1 2151 aa19.26■□□□□ 0.67
ATG4D-209ENST00000588857 CEP78Q5JTW2 689 aa19.26■□□□□ 0.67
ATG4D-209ENST00000588857 LRRTM1Q86UE6 522 aa19.26■□□□□ 0.67
ATG4D-209ENST00000588857 OR5L1Q8NGL2 311 aa19.26■□□□□ 0.67
ATG4D-209ENST00000588857 TBCCD1Q9NVR7 557 aa19.26■□□□□ 0.67
ATG4D-209ENST00000588857 CRNNQ9UBG3 495 aaPredicted RBP19.26■□□□□ 0.67
ATG4D-209ENST00000588857 FLNCQ14315 2725 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 A6NIN4 97 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 ANXA2P2A6NMY6 339 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 NOTOA8MTQ0 251 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 NGFP01138 241 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 IGLV1-44P01699 117 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 IGFBP3P17936 291 aaPredicted RBP19.25■□□□□ 0.67
ATG4D-209ENST00000588857 WNT5AP41221 380 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 ASCL1P50553 236 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 PSMD7P51665 324 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 ZNF92Q03936 586 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 TAB1Q15750 504 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 ALKBH2Q6NS38 261 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 MTFR2Q6P444 385 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 SFXN4Q6P4A7 337 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 Q6ZSR3 168 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 PGAP1Q75T13 922 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 SEMA6DQ8NFY4 1073 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 SPSB4Q96A44 273 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 PIGLQ9Y2B2 252 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 STARD10Q9Y365 291 aa19.25■□□□□ 0.67
ATG4D-209ENST00000588857 DIDO1Q9BTC0 2240 aaKnown RBP19.25■□□□□ 0.67
ATG4D-209ENST00000588857 A0A075B6Q4 140 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 DHRS7CA6NNS2 312 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 CECR9P0C854 216 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 MAP2K3P46734 347 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 BMXP51813 675 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 ADORA2A-AS1P86434 159 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 IDNKQ5T6J7 187 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 ASPHD2Q6ICH7 369 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 ZNF101Q8IZC7 436 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 TBC1D15Q8TC07 691 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 C10orf35Q96D05 121 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 CCDC120Q96HB5 630 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 OR10A4Q9H209 315 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 ERRFI1Q9UJM3 462 aaPredicted RBP19.24■□□□□ 0.67
ATG4D-209ENST00000588857 V9GY05 133 aa19.24■□□□□ 0.67
ATG4D-209ENST00000588857 A0A0G2JK05 382 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 MEGF11A6BM72 1044 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 J3QW42 95 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms