RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZNF610Q8N9Z0 462 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 OR13C9Q8NGT0 318 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 OR5H6Q8NGV6 325 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 OR2AE1Q8NHA4 323 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 C10orf35Q96D05 121 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 REEP6Q96HR9 211 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 POM121L2Q96KW2 1035 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 LIN7BQ9HAP6 207 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 STEAP1Q9UHE8 339 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 TINAGQ9UJW2 476 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 SPATA2Q9UM82 520 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 ATMQ13315 3056 aa9.91□□□□□ -0.82
SMAD4-205ENST00000588745 INTS1Q8N201 2190 aaKnown RBP9.9□□□□□ -0.82
SMAD4-205ENST00000588745 FABP12A6NFH5 140 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 A6NIN4 97 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 DHRS7CA6NNS2 312 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 FAM25AB3EWG3 89 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 FAM25CB3EWG5 89 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 FAM25GB3EWG6 89 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 SLC17A2O00624 439 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 SULT1B1O43704 296 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 EIF4EP06730 217 aaKnown RBP9.9□□□□□ -0.82
SMAD4-205ENST00000588745 CALCBP10092 127 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 CD37P11049 281 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 ELK1P19419 428 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 BDKRB2P30411 391 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 APLNRP35414 380 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 CLDN12P56749 244 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 SCAND1P57086 179 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 TSC22D1Q15714 1073 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 ZNF79Q15937 498 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 METAP1DQ6UB28 335 aaPredicted RBP9.9□□□□□ -0.82
SMAD4-205ENST00000588745 FAM131AQ6UXB0 335 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 CXorf67Q86X51 503 aaPredicted RBP9.9□□□□□ -0.82
SMAD4-205ENST00000588745 OR5D14Q8NGL3 314 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 AKAP1Q92667 903 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMAD4-205ENST00000588745 CMTM3Q96MX0 182 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 ZNF75AQ96N20 296 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 CCDC32Q9BV29 185 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 EXTL2Q9UBQ6 330 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 ETV7Q9Y603 341 aa9.9□□□□□ -0.82
SMAD4-205ENST00000588745 hCG_38984A0A1B0GV85 526 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 UPK1BO75841 260 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 APOA1P02647 267 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 SERPINA5P05154 406 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 ERCC1P07992 297 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-205ENST00000588745 SFTPCP11686 197 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 CCL2P13500 99 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 FAHP16930 419 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 ZNF14P17017 642 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-205ENST00000588745 CCNOP22674 350 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 PTBP1P26599 531 aaKnown RBP eCLIP9.89□□□□□ -0.83
SMAD4-205ENST00000588745 TALDO1P37837 337 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 EVX1P49640 407 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 RAB11BQ15907 218 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 TBC1D28Q2M2D7 210 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 UBE2NLQ5JXB2 153 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 FAM166AQ6J272 317 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 BHLHA15Q7RTS1 189 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-205ENST00000588745 LYPD6Q86Y78 171 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 OR5AS1Q8N127 324 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 JAGN1Q8N5M9 183 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 SLC30A7Q8NEW0 376 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 SEMA6DQ8NFY4 1073 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 OR6M1Q8NGM8 313 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 PP6455Q8WZ26 134 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 SPSB4Q96A44 273 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 APOBEC3DQ96AK3 386 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-205ENST00000588745 FOXRED1Q96CU9 486 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-205ENST00000588745 MS4A3Q96HJ5 214 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 SDHCQ99643 169 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-205ENST00000588745 SOSTQ9BQB4 213 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 CHST5Q9GZS9 411 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 SRRQ9GZT4 340 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 OBP2BQ9NPH6 170 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 TMEM138Q9NPI0 162 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 CYSLTR2Q9NS75 346 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 CGGBP1Q9UFW8 167 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-205ENST00000588745 OR5V1Q9UGF6 321 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 PIGLQ9Y2B2 252 aa9.89□□□□□ -0.83
SMAD4-205ENST00000588745 A0A1W2PR80 420 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 AZGP1P25311 298 aaKnown RBP9.88□□□□□ -0.83
SMAD4-205ENST00000588745 HTR2CP28335 458 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 OPRM1P35372 400 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 MAP2K3P46734 347 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 FAM3AP98173 230 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 ZNF92Q03936 586 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 RIPPLY1Q0D2K3 151 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 RIN1Q13671 783 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 IL18Q14116 193 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 P2RY14Q15391 338 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 OR8B8Q15620 311 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 ZNF181Q2M3W8 571 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 C1orf100Q5SVJ3 147 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 XKRXQ6PP77 449 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 ZNF474Q6S9Z5 364 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-205ENST00000588745 UTS2BQ765I0 119 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 SNX29P2Q8IUI4 249 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 WDR31Q8NA23 367 aa9.88□□□□□ -0.83
SMAD4-205ENST00000588745 OR4M1Q8NGD0 313 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms