RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 POU3F4P49335 361 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 CLRN1P58418 232 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 RAP2BP61225 183 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 FOXF1Q12946 379 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 MYBPHQ13203 477 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 MELKQ14680 651 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 RBMS2Q15434 407 aaKnown RBP5.08□□□□□ -1.6
SDF2-206ENST00000587788 DEFB109BQ30KR1 87 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 C2orf76Q3KRA6 126 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 OR5M10Q6IEU7 315 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 ARSKQ6UWY0 536 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 NHLRC1Q6VVB1 395 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 GLDNQ6ZMI3 551 aaPredicted RBP5.08□□□□□ -1.6
SDF2-206ENST00000587788 PRSS45Q7RTY3 260 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 DCXRQ7Z4W1 244 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 SERPINA12Q8IW75 414 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 ELMOD2Q8IZ81 293 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 GTPBP8Q8N3Z3 284 aaPredicted RBP5.08□□□□□ -1.6
SDF2-206ENST00000587788 DTX3Q8N9I9 347 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 NOXO1Q8NFA2 376 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 OR5D14Q8NGL3 314 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 OR1J4Q8NGS1 313 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 ZNF431Q8TF32 576 aaPredicted RBP5.08□□□□□ -1.6
SDF2-206ENST00000587788 CCDC107Q8WV48 283 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 GIMAP1Q8WWP7 306 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 PSMF1Q92530 271 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 INTS12Q96CB8 462 aaKnown RBP5.08□□□□□ -1.6
SDF2-206ENST00000587788 ARL5BQ96KC2 179 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 AMELYQ99218 206 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 SLC25A21Q9BQT8 299 aaPredicted RBP5.08□□□□□ -1.6
SDF2-206ENST00000587788 UQCC2Q9BRT2 126 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 NAA11Q9BSU3 229 aaPredicted RBP5.08□□□□□ -1.6
SDF2-206ENST00000587788 BEX2Q9BXY8 128 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 ZNF436Q9C0F3 470 aaPredicted RBP5.08□□□□□ -1.6
SDF2-206ENST00000587788 ALX4Q9H161 411 aaPredicted RBP5.08□□□□□ -1.6
SDF2-206ENST00000587788 NOX3Q9HBY0 568 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 SH2D2AQ9NP31 389 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 FBLN5Q9UBX5 448 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 CYB5R1Q9UHQ9 305 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 ZNF222Q9UK12 451 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 RAB22AQ9UL26 194 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 GTF2A1LQ9UNN4 478 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 VDAC3Q9Y277 283 aa5.08□□□□□ -1.6
SDF2-206ENST00000587788 TRAV18A0A075B6X5 111 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 LOC107986453A0A1B0GWG9 222 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 AQP7P3A6NL99 342 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 ZNF878C9JN71 531 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 KLRC4-KLRK1H3BQV0 150 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 K7EM74 188 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 SULT2B1O00204 365 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 ZNF354AO60765 605 aaPredicted RBP5.07□□□□□ -1.6
SDF2-206ENST00000587788 ZNF780AO75290 641 aaPredicted RBP5.07□□□□□ -1.6
SDF2-206ENST00000587788 RGS11O94810 467 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 PNPP00491 289 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 TPOP07202 933 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 GIPP09681 153 aaPredicted RBP5.07□□□□□ -1.6
SDF2-206ENST00000587788 PGA4P0DJD7 388 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 PGA3P0DJD8 388 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 HLA-DOBP13765 273 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 ZNF17P17021 662 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 ZNF43P17038 809 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 TBPP20226 339 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 CTSSP25774 331 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 ITGA3P26006 1051 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 BDKRB2P30411 391 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 CCR6P51684 374 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 BIDP55957 195 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 DSCR4P56555 118 aaPredicted RBP5.07□□□□□ -1.6
SDF2-206ENST00000587788 CLDN12P56749 244 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 TAS2R19P59542 299 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 LSM6P62312 80 aaKnown RBP5.07□□□□□ -1.6
SDF2-206ENST00000587788 GRB2P62993 217 aaKnown RBP5.07□□□□□ -1.6
SDF2-206ENST00000587788 CSNK2A1P68400 391 aaPredicted RBP5.07□□□□□ -1.6
SDF2-206ENST00000587788 GALK2Q01415 458 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 OC90Q02509 493 aaPredicted RBP5.07□□□□□ -1.6
SDF2-206ENST00000587788 Q0VFX4 171 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 MEF2DQ14814 521 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 ZMYND11Q15326 602 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 TAF13Q15543 124 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 MPPED2Q15777 294 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 ETFDHQ16134 617 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 HIST3H3Q16695 136 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 TMEM177Q53S58 311 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 RNASE12Q5GAN4 147 aaKnown RBP5.07□□□□□ -1.6
SDF2-206ENST00000587788 GLYATL3Q5SZD4 288 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 SFRP4Q6FHJ7 346 aaPredicted RBP5.07□□□□□ -1.6
SDF2-206ENST00000587788 OR7E24Q6IFN5 339 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 C16orf47Q6ZP98 133 aaPredicted RBP5.07□□□□□ -1.6
SDF2-206ENST00000587788 TMPPEQ6ZT21 453 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 ESPNLQ6ZVH7 1005 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 PGAP1Q75T13 922 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 ADGRE4PQ86SQ3 457 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 IZUMO1Q8IYV9 350 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 SLC7A5P1Q8MH63 180 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 GALNT16Q8N428 558 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 C9orf62Q8N4C0 152 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 SLC22A24Q8N4F4 322 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 TMEM229BQ8NBD8 167 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 DNAAF1Q8NEP3 725 aa5.07□□□□□ -1.6
SDF2-206ENST00000587788 OR10G3Q8NGC4 313 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms