RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 PPP1R3CQ9UQK1 317 aa7.15□□□□□ -1.26
SDF2-204ENST00000587338 MYRFQ9Y2G1 1151 aa7.15□□□□□ -1.26
SDF2-204ENST00000587338 IER3IP1Q9Y5U9 82 aa7.15□□□□□ -1.26
SDF2-204ENST00000587338 HSPE1-MOB4S4R3N1 261 aa7.15□□□□□ -1.26
SDF2-204ENST00000587338 C5orf63A6NC05 138 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 MCIDASD6RGH6 385 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 PRKYO43930 277 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 GPR137BO60478 399 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 MPZL2O60487 215 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 TNFAIP8O95379 198 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 SLC2A10O95528 541 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 IGF2P01344 180 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 IFNGP01579 166 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 F13BP05160 661 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 LYNP07948 512 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 MMP7P09237 267 aaPredicted RBP7.14□□□□□ -1.27
SDF2-204ENST00000587338 WNT2P09544 360 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 ASAH2BP0C7U1 165 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 PGA4P0DJD7 388 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 PGA3P0DJD8 388 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 TNFRSF1AP19438 455 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 GRK5P34947 590 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 GDI2P50395 445 aaKnown RBP7.14□□□□□ -1.27
SDF2-204ENST00000587338 ZNF84P51523 738 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 CLRN1P58418 232 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 FXYD6P3P58550 94 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 RPL15P61313 204 aaKnown RBP7.14□□□□□ -1.27
SDF2-204ENST00000587338 FGF12P61328 243 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 PPP1CBP62140 327 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 ERVK-25P63136 954 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 RPL18Q07020 188 aaKnown RBP7.14□□□□□ -1.27
SDF2-204ENST00000587338 RBM48Q5RL73 367 aaKnown RBP7.14□□□□□ -1.27
SDF2-204ENST00000587338 C6orf141Q5SZD1 244 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 KPRPQ5T749 579 aaPredicted RBP7.14□□□□□ -1.27
SDF2-204ENST00000587338 ZNF774Q6NX45 483 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 DPY19L2P2Q6ZN68 376 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 REC114Q7Z4M0 266 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 KLBQ86Z14 1044 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 OR2Z1Q8NG97 314 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 AKR7LQ8NHP1 331 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 ITLN1Q8WWA0 313 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 RAB40AQ8WXH6 277 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 DYRK2Q92630 601 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 SLC25A44Q96H78 314 aaPredicted RBP7.14□□□□□ -1.27
SDF2-204ENST00000587338 FAM71F1Q96KD3 344 aaPredicted RBP7.14□□□□□ -1.27
SDF2-204ENST00000587338 POM121L2Q96KW2 1035 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 Q96MT0 163 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 SIGLEC11Q96RL6 698 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 PCGF1Q9BSM1 259 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 SCN3BQ9NY72 215 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 DNAJC27Q9NZQ0 273 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 H2AFY2Q9P0M6 372 aaPredicted RBP7.14□□□□□ -1.27
SDF2-204ENST00000587338 GRHPRQ9UBQ7 328 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 BAIAP2Q9UQB8 552 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 HIF3AQ9Y2N7 669 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 POMT1Q9Y6A1 747 aa7.14□□□□□ -1.27
SDF2-204ENST00000587338 LOC100509620A0A075B734 347 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 TEX13CA0A0J9YWL9 993 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 RIIAD1A6NNX1 92 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 PTGES3LE9PB15 166 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 H0YL77 283 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 BHLHE40O14503 412 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 SURF4O15260 269 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 ZNF205O95201 554 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 IGHG1P01857 330 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 VSIG8P0DPA2 414 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 ZNF3P17036 446 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 PAICSP22234 425 aaKnown RBP7.13□□□□□ -1.27
SDF2-204ENST00000587338 CDAP32320 146 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 MMP16P51512 607 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 SMN1Q16637 294 aaKnown RBP7.13□□□□□ -1.27
SDF2-204ENST00000587338 ANKDD1AQ495B1 522 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 NRN1LQ496H8 165 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 SAMD5Q5TGI4 173 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 BCDIN3DQ7Z5W3 292 aaKnown RBP7.13□□□□□ -1.27
SDF2-204ENST00000587338 SDR9C7Q8NEX9 313 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 OR8J1Q8NGP2 316 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 OR4K13Q8NH42 304 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 RHOXF1Q8NHV9 184 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 TBC1D15Q8TC07 691 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 TMEM163Q8TC26 289 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 TRUB1Q8WWH5 349 aaKnown RBP7.13□□□□□ -1.27
SDF2-204ENST00000587338 LIPHQ8WWY8 451 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 HDAC2Q92769 488 aaKnown RBP7.13□□□□□ -1.27
SDF2-204ENST00000587338 MCHR2Q969V1 340 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 DACT3Q96B18 629 aaPredicted RBP7.13□□□□□ -1.27
SDF2-204ENST00000587338 RASD2Q96D21 266 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 NUDT16L1Q9BRJ7 211 aaKnown RBP7.13□□□□□ -1.27
SDF2-204ENST00000587338 CCDC90BQ9GZT6 254 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 KCNN2Q9H2S1 579 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 AMBNQ9NP70 447 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 INIPQ9NRY2 104 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 TAS2R5Q9NYW4 299 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 KLHL21Q9UJP4 597 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 BLOC1S6Q9UL45 172 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 TPRKBQ9Y3C4 175 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 ADAM18Q9Y3Q7 739 aa7.13□□□□□ -1.27
SDF2-204ENST00000587338 KIR2DS1A0A191URI9 304 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 A0A1W2PRG6 482 aa7.12□□□□□ -1.27
SDF2-204ENST00000587338 FAM183AA6NL82 134 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms