RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 COQ7Q99807 217 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 CITED1Q99966 193 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 FUZQ9BT04 418 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 FN3KQ9H479 309 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 SMURF1Q9HCE7 757 aa9.64□□□□□ -0.87
LIG3-207ENST00000586119 SAMHD1Q9Y3Z3 626 aaKnown RBP9.64□□□□□ -0.87
LIG3-207ENST00000586119 CLPSL1A2RUU4 121 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 ARRDC5A6NEK1 342 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 UNC119BA6NIH7 251 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 C3orf80F5H4A9 247 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 IFNL4K9M1U5 179 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 LCATP04180 440 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 CRYBA1P05813 215 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 CA6P23280 308 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 RPS27P42677 84 aaKnown RBP9.63□□□□□ -0.87
LIG3-207ENST00000586119 ATP6AP1Q15904 470 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 GPR157Q5UAW9 335 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 GPR139Q6DWJ6 353 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 ASPHD2Q6ICH7 369 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 SLC18B1Q6NT16 456 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 C17orf107Q6ZR85 190 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 DCDC5Q6ZRR9 648 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 ZNF826PQ6ZT77 177 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 C1QL4Q86Z23 238 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 OR4C15Q8NGM1 316 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 OR4K13Q8NH42 304 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 STMN2Q93045 179 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 NRBF2Q96F24 287 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 TECTBQ96PL2 329 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 ERMAPQ96PL5 475 aaPredicted RBP9.63□□□□□ -0.87
LIG3-207ENST00000586119 GPX7Q96SL4 187 aaPredicted RBP9.63□□□□□ -0.87
LIG3-207ENST00000586119 NMNAT3Q96T66 252 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 BEX1Q9HBH7 125 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 PNRC2Q9NPJ4 139 aaKnown RBP9.63□□□□□ -0.87
LIG3-207ENST00000586119 LYVE1Q9Y5Y7 322 aa9.63□□□□□ -0.87
LIG3-207ENST00000586119 A0A1B0GW55 424 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 LRRC30A6NM36 301 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 TOX4O94842 621 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 CCNB2O95067 398 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 TXNDC12O95881 172 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 IGHV4-59P01825 116 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 DUX4L2P0CJ85 424 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 DUX4L3P0CJ86 424 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 DUX4L4P0CJ87 422 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 DUX4L5P0CJ88 424 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 DUX4L6P0CJ89 424 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 DUX4L7P0CJ90 424 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 PSKH1P11801 424 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 IRF2P14316 349 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 CPT2P23786 658 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 CD200P41217 278 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 GATA4P43694 442 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 DLX1P56177 255 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 ARF6P62330 175 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 COX10Q12887 443 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 MICAQ29983 383 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 SNAI3Q3KNW1 292 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 HIST2H2BDQ6DRA6 164 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 BRICD5Q6PL45 260 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 DUX4L9Q6RFH8 374 aaPredicted RBP9.62□□□□□ -0.87
LIG3-207ENST00000586119 DPY19L2P2Q6ZN68 376 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 NLRC3Q7RTR2 1065 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 C1orf87Q8N0U7 546 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 SLC26A10Q8NG04 563 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 OR4F5Q8NH21 305 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 OR2AE1Q8NHA4 323 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 Q8TCH9 128 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 ZNRF4Q8WWF5 429 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 LHX4Q969G2 390 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 PITX2Q99697 317 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 HCAR1Q9BXC0 346 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 NDEL1Q9GZM8 345 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 HDHD2Q9H0R4 259 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 MRPL22Q9NWU5 206 aaKnown RBP9.62□□□□□ -0.87
LIG3-207ENST00000586119 DUX4Q9UBX2 424 aa9.62□□□□□ -0.87
LIG3-207ENST00000586119 IGHV3OR15-7A0A075B7D8 119 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 A0A0U1RQK1 487 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 OR6C68A6NDL8 312 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 ZNF879B4DU55 563 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 J3QW42 95 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 PHYHO14832 338 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 ADAM20O43506 726 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 ENSAO43768 121 aaKnown RBP9.61□□□□□ -0.87
LIG3-207ENST00000586119 OR10H3O60404 316 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 E2F6O75461 281 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 TIPRLO75663 272 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 NDUFA7O95182 113 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 FSTL3O95633 263 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 GYPAP02724 150 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 HIST1H1CP16403 213 aaKnown RBP9.61□□□□□ -0.87
LIG3-207ENST00000586119 GGT2P36268 569 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 RPS6KA3P51812 740 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 ZNF92Q03936 586 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 OR8G1Q15617 311 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 LYPD4Q6UWN0 246 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 OR11L1Q8NGX0 322 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 OR5K1Q8NHB7 308 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 LINC01006Q8NI28 216 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 GNPDA2Q8TDQ7 276 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 PYDC1Q8WXC3 89 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms