RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ENTPD1P49961 510 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 SLC25A1P53007 311 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 SEC61A1P61619 476 aaKnown RBP9.3□□□□□ -0.92
CCDC47-206ENST00000584112 GNB2P62879 340 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 DBPQ10586 325 aaPredicted RBP9.3□□□□□ -0.92
CCDC47-206ENST00000584112 TAF13Q15543 124 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 ASPHD2Q6ICH7 369 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 DRAM2Q6UX65 266 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 BTNL3Q6UXE8 466 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 RBMS3Q6XE24 437 aaKnown RBP9.3□□□□□ -0.92
CCDC47-206ENST00000584112 NLRC3Q7RTR2 1065 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 DCXRQ7Z4W1 244 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 CCDC197Q8NCU1 140 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 OR8B3Q8NGG8 313 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 OR8D4Q8NGM9 314 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 OR10S1Q8NGN2 331 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 OR9Q1Q8NGQ5 310 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 C22orf15Q8WYQ4 148 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 NEIL1Q96FI4 390 aaPredicted RBP9.3□□□□□ -0.92
CCDC47-206ENST00000584112 LRGUKQ96M69 825 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 OR8B2Q96RD0 313 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 COPS4Q9BT78 406 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 OPA3Q9H6K4 179 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 NUP50Q9UKX7 468 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 PRPF19Q9UMS4 504 aaKnown RBP9.3□□□□□ -0.92
CCDC47-206ENST00000584112 SAMHD1Q9Y3Z3 626 aaKnown RBP9.3□□□□□ -0.92
CCDC47-206ENST00000584112 COMMD3-BMI1R4GMX3 469 aa9.3□□□□□ -0.92
CCDC47-206ENST00000584112 GGT3PA6NGU5 568 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 RIIAD1A6NNX1 92 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 CD300LBA8K4G0 201 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF878C9JN71 531 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 GMDSO60547 372 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 SOX14O95416 240 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 SPARCP09486 303 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 PPIAL4GP0DN37 164 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 RAP2AP10114 183 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 PPP1R8Q12972 351 aaKnown RBP9.29□□□□□ -0.92
CCDC47-206ENST00000584112 CRMP1Q14194 572 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 OR8G1Q15617 311 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 KCNJ8Q15842 424 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 PCK2Q16822 640 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF404Q494X3 552 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 TEX30Q5JUR7 227 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF362Q5T0B9 420 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-206ENST00000584112 LRRN1Q6UXK5 716 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 DCDC5Q6ZRR9 648 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 NAA40Q86UY6 237 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 KLBQ86Z14 1044 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 SPERTQ8NA61 448 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 OR51L1Q8NGJ5 315 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 OR6K6Q8NGW6 343 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 TEX47Q8TBZ9 253 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 Q8TCH9 128 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 WFDC12Q8WWY7 111 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 DVL3Q92997 716 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-206ENST00000584112 SLAMF6Q96DU3 332 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 ASB9Q96DX5 294 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 KCNJ15Q99712 375 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 TMEM246Q9BRR3 403 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 ADAT1Q9BUB4 502 aaKnown RBP9.29□□□□□ -0.92
CCDC47-206ENST00000584112 C1orf21Q9H246 121 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 MRPL15Q9P015 296 aaKnown RBP9.29□□□□□ -0.92
CCDC47-206ENST00000584112 PCDHGB5Q9Y5G0 923 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 U3KQV3 271 aa9.29□□□□□ -0.92
CCDC47-206ENST00000584112 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.28□□□□□ -0.92
CCDC47-206ENST00000584112 IGHV3-64DA0A0J9YX35 117 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF593O00488 134 aaPredicted RBP9.28□□□□□ -0.92
CCDC47-206ENST00000584112 XRCC2O43543 280 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 FAM20BO75063 409 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF205O95201 554 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 APOC1P02654 83 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 GYPBP06028 91 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 HOXB6P17509 224 aaKnown RBP9.28□□□□□ -0.92
CCDC47-206ENST00000584112 SPI1P17947 270 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 CA6P23280 308 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 RPS27P42677 84 aaKnown RBP9.28□□□□□ -0.92
CCDC47-206ENST00000584112 SLC15A1P46059 708 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 PITPNBP48739 271 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 KRTAP10-3P60369 221 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 GRB2P62993 217 aaKnown RBP9.28□□□□□ -0.92
CCDC47-206ENST00000584112 MS4A2Q01362 244 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF92Q03936 586 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 PAX8Q06710 450 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 MZT1Q08AG7 82 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 MAB21L1Q13394 359 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 SNAI3Q3KNW1 292 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 BRICD5Q6PL45 260 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 LYPD4Q6UWN0 246 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 CD300LDQ6UXZ3 194 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 ZNF511Q8NB15 262 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 PLPP7Q8NBV4 271 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 OR10G2Q8NGC3 310 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 OR4Q3Q8NH05 313 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 ZNRF4Q8WWF5 429 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 CITED1Q99966 193 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 NMNAT2Q9BZQ4 307 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 TOR3AQ9H497 397 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 SP140LQ9H930 580 aa9.28□□□□□ -0.92
CCDC47-206ENST00000584112 ZMAT3Q9HA38 289 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms