RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	UBALD2	Q8IYN6	164 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	OR6N2	Q8NGY6	317 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	OR2T27	Q8NH04	317 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	C16orf52	Q8NHV5	167 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	S100A16	Q96FQ6	103 aa	Known RBP	10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	AMELY	Q99218	206 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	ATG101	Q9BSB4	218 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	JAM3	Q9BX67	310 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	RTN4R	Q9BZR6	473 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	FOXJ3	Q9UPW0	622 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	TRAV1-2	A0A0B4J238	106 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	ANXA2P2	A6NMY6	339 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	PATE3	B3GLJ2	98 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	CT45A8	P0DMV1	189 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	CT45A9	P0DMV2	189 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	NFYA	P23511	347 aa	Predicted RBP	10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	FASLG	P48023	281 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	C14orf28	Q4W4Y0	310 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	CT45A2	Q5DJT8	189 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	CLLU1	Q5K131	121 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	RPL22L1	Q6P5R6	122 aa	Known RBP	10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	TMEM205	Q6UW68	189 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	RAB1C	Q92928	201 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	VSTM2L	Q96N03	204 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	STAC	Q99469	402 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	ELOVL1	Q9BW60	279 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	FRRS1L	Q9P0K9	344 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	RIF1	Q5UIP0	2472 aa	Known RBP	10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	AHCTF1	Q8WYP5	2266 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	TRAV18	A0A075B6X5	111 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	LAMTOR5	O43504	91 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	HLA-DQA2	P01906	255 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	RAB38	P57729	211 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	TAS2R20	P59543	309 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	RNF151	Q2KHN1	245 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	KIF26B	Q2KJY2	2108 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	CCDC157	Q569K6	752 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	C1orf189	Q5VU69	101 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	OR10K2	Q6IF99	312 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	ATRAID	Q6UW56	229 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	CLEC9A	Q6UXN8	241 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	FAM219A	Q8IW50	185 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	OR51S1	Q8NGJ8	323 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	OR6M1	Q8NGM8	313 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	HGD	Q93099	445 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	NKD1	Q969G9	470 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	TMEM106A	Q96A25	262 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	R3HDM4	Q96D70	268 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	NAA11	Q9BSU3	229 aa	Predicted RBP	10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	GPR160	Q9UJ42	338 aa		10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	PTRH2	Q9Y3E5	179 aa	Known RBP	10.37	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	ASPM	Q8IZT6	3477 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	TMEM150C	B9EJG8	249 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	KLRC4-KLRK1	H3BQV0	150 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	AIP	O00170	330 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	CREBL2	O60519	120 aa	Predicted RBP	10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	IFNA2	P01563	188 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	ANXA2	P07355	339 aa	Known RBP	10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	CTXN1	P60606	82 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	SORD	Q00796	357 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	CSRP2	Q16527	193 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	DMRTC1	Q5HYR2	192 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	C1QL3	Q5VWW1	255 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	SHISA6	Q6ZSJ9	500 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	MDGA2	Q7Z553	956 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	SPAG16	Q8N0X2	631 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	ZNF676	Q8N7Q3	588 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	OR4C16	Q8NGL9	310 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	MRGPRD	Q8TDS7	321 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	ZNF2	Q9BSG1	426 aa	Predicted RBP	10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	RGCC	Q9H4X1	137 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	LDAH	Q9H6V9	325 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	GEMIN7	Q9H840	131 aa	Known RBP	10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	MKKS	Q9NPJ1	570 aa	Predicted RBP	10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	INPP5E	Q9NRR6	644 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	FBXO4	Q9UKT5	387 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	HSF4	Q9ULV5	492 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	SLC22A13	Q9Y226	551 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	IGKV1D-42	A0A075B6H8	117 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063		M0QYG6	137 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	SPRY1	O43609	319 aa	Predicted RBP	10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	SUSD5	O60279	629 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	SLC35E2	P0CK97	266 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	GZMH	P20718	246 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	CDKN1A	P38936	164 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	DHODH	Q02127	395 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	NHLH2	Q02577	135 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	OR8G1	Q15617	311 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	LRRN1	Q6UXK5	716 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	ARHGEF39	Q8N4T4	335 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	BCORP1	Q8N888	145 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	OR5AK2	Q8NH90	309 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	DUSP19	Q8WTR2	217 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	TNFAIP8L1	Q8WVP5	186 aa		10.36	□□□□□ -0.75
CDK5RAP3-231	ENST00000584063	FAM210B	Q96KR6	192 aa		10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms